ggKbase home page

SCN18_25_8_15_R2_B_scaffold_1503_6

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(6968..8440)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037DE55E similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 486.0
  • Bit_score: 783
  • Evalue 8.70e-224
Putative sodium-coupled permease {ECO:0000313|EMBL:EPR65492.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.6
  • Coverage: 486.0
  • Bit_score: 670
  • Evalue 1.50e-189
Na+/solute symporter similarity KEGG
DB: KEGG
  • Identity: 64.2
  • Coverage: 486.0
  • Bit_score: 664
  • Evalue 2.20e-188

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1473
ATGTCACTTCACCCTATAGATATTTTTGTAGTAGCACTTTTTTTCCTGAGCATGATCGTAATAGGTATACTGTCTTATTTTAAAAGTAAAAACTCAGAAGATTATTTTGTTGCCGGGGGAAAGCTTCCCTGGTGGCTATCCGGCATATCCCACCATGTATCAGGACATAGTGGTGCCGTGTTTGTTGCATATGCTGCCGTAGCATATACCCATGGCTTTACAATGTATATGTGGTGGGCATTCCCCGTTGCCATTGTTATTATGGCAAGCGCCAAAATCTTCCCGGTATACTGGTTTCGCCTCCGGAAAAATTTTCACATACAATCACCATTGGAATATCTTAAAACAAGGTACAATCTCGCCACACAACAAATTATGGCATGGAGCGGCACGCTGCTAAAAGTATTTGATGTAGGCGCCAAGTGGGCCGCTATAGGAATATTATTGCATGTGGTTGCCGGTATACCTATGACACAAGGTATTCTTATATCAGGTATTGTTACTTTAATTTATGTAACATTCGGAGGATTATGGGGCGTGATCATTACCGATCTTATACAATTTATTGTGCAATTGGTGGGCAGTATAGTAATGTTTGTACTGGTGGTTAAACGGCTTGGAGGTACAGCATCCATAACAGGCATCTGGAAACAATTACCACCCGAACACAGCCAGTTGTTTAATGATCCGTATACAGCAGGATTTGTAGGCATTATGTTCTTTCTATACTTTCTGAGTTACAATGGAGGAATGTGGAGCCTGGCTACAAGATATATTTCCTCCCCTTCAGAAAAGGAAGCATCAAAAGCCGCATGGTTATCGGGGTTTTTGTACCTTATCTGGCCGTTGATTTTATTCTTTCCTATGTGGGCATCGCCCATAATACTTCCGGGATTGGAAGACCCCGGTACATCTTACGGAAGACTTATGCTTGAAATGCTTCCCGCAGGAATGATAGGTCTGGTTATTGCCTCACTGTTTGCAGCTACAATGGGAATGACATCGTCTGATGTGAACACTATTGCGGCCGTTATTACCAGGGATATTCTTCCTGTATTATCAAAGCAATTTGCGAACGATAAAAATCCTTTACGCACTGCCCGCATCACTACCTTCCTGTTTACACTTGCCACCATTGTTGTAGCCATAAATTATGAAAGGTTTGGCGGAGTGCTTGGGTTGATCGTAAAATGGTTTGGCGCACTGCTTGGACCAACAGCCCTGCCTTTATTATTCGGGTTACTGCCCACATTTAAAACATGTGGCTCAAAGGCTGCCATTGCTTCCATTGCTGCCGGTATTATTACATTTATCATCACTAAAAATATTACATTTAACAGTTTGGCGCTTGAAGTAGGCCTGCCTACGATAGTTGCTGCTGCTGTGTATATTATTACCGGGTTATTAACCCCTGCTGTACCTGAGAGGGTTATAAACCTGATGGCATCTTTAAAAAAATCAACTCAAAATTAA
PROTEIN sequence
Length: 491
MSLHPIDIFVVALFFLSMIVIGILSYFKSKNSEDYFVAGGKLPWWLSGISHHVSGHSGAVFVAYAAVAYTHGFTMYMWWAFPVAIVIMASAKIFPVYWFRLRKNFHIQSPLEYLKTRYNLATQQIMAWSGTLLKVFDVGAKWAAIGILLHVVAGIPMTQGILISGIVTLIYVTFGGLWGVIITDLIQFIVQLVGSIVMFVLVVKRLGGTASITGIWKQLPPEHSQLFNDPYTAGFVGIMFFLYFLSYNGGMWSLATRYISSPSEKEASKAAWLSGFLYLIWPLILFFPMWASPIILPGLEDPGTSYGRLMLEMLPAGMIGLVIASLFAATMGMTSSDVNTIAAVITRDILPVLSKQFANDKNPLRTARITTFLFTLATIVVAINYERFGGVLGLIVKWFGALLGPTALPLLFGLLPTFKTCGSKAAIASIAAGIITFIITKNITFNSLALEVGLPTIVAAAVYIITGLLTPAVPERVINLMASLKKSTQN*