ggKbase home page

SCN18_25_8_15_R2_B_scaffold_1512_15

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(11606..12502)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VZN4_DYAFD similarity UNIREF
DB: UNIREF100
  • Identity: 52.6
  • Coverage: 289.0
  • Bit_score: 323
  • Evalue 1.90e-85
Uncharacterized protein {ECO:0000313|EMBL:ETZ23767.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.1
  • Coverage: 290.0
  • Bit_score: 330
  • Evalue 1.30e-87
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 289.0
  • Bit_score: 323
  • Evalue 5.50e-86

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 897
ATGAACGATTACTGCAAGTACATGAGCGGTACGCTCGCAGAAGAAAAATGGGGGCTATATATAGATACAGCGGGTTTCTCAAAAGTATACCCTCATCAGCATTACCCCAAAAATTACGAACATCCGTCTACGCATACATTCTCATGGAGTAAAGGACGCATTTTGCGCGGGCATCAATTAATATATGTGTCAAGGGGTGGCGGTATTTTTGAATCAGAATTTTCAGACCCTATTGAAATTACGGAAGGCACCTGCATGTTTTTGCATGCAGGTGTATGGCACCGCTATAAACCTAATGACAATTCTGGCTGGGATGAATACTGGATAGGCTTTAACGGCAATTATGCCAATGACCTGATGCGAAATGATTTTTTCAATGTTAAATACCCTTTCATTAAAGTAGGCTTATCATCTGAACTATTAAATCTTTTTCAAAAGCTTATTGAAACCGTGCATACTGCTCCATCGGGCTATCAGCAAATAAGTTCTGGCATTACGCTGCAGATATTGGGGTATTTATATTCTGTATCATTAAGTAATGAAACGGAAAAATCACCAATAGGGCGATTGATAGAAAAAGCAAAATTTTTATTACAGGAATCTTTGGAAAAGCATATTGATCTTGAAAAAATGGCCCGCGAATTACCAATGGGTTACTCTTCTTTCAGAAAAGAGTTTAAGCGTCTTACCGGCGAACCGCCTAATCAATTTGTATTAAATCTCAGGTTAACCAGGGCAAAATATTTACTGGAAACAACAACATTAACTATTAACGAGATTGCTCAGCAAACGGGTTTTGAATCCGTATTTTATTTTTCCAAGTTGTTTAAAAAAAGAAATGGCAAATCACCTAAATATTACAGAAGTAAAACAGATGAAGAAAGTTTTGAGGATTAG
PROTEIN sequence
Length: 299
MNDYCKYMSGTLAEEKWGLYIDTAGFSKVYPHQHYPKNYEHPSTHTFSWSKGRILRGHQLIYVSRGGGIFESEFSDPIEITEGTCMFLHAGVWHRYKPNDNSGWDEYWIGFNGNYANDLMRNDFFNVKYPFIKVGLSSELLNLFQKLIETVHTAPSGYQQISSGITLQILGYLYSVSLSNETEKSPIGRLIEKAKFLLQESLEKHIDLEKMARELPMGYSSFRKEFKRLTGEPPNQFVLNLRLTRAKYLLETTTLTINEIAQQTGFESVFYFSKLFKKRNGKSPKYYRSKTDEESFED*