ggKbase home page

SCN18_25_8_15_R2_B_scaffold_1515_2

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(1054..2691)

Top 3 Functional Annotations

Value Algorithm Source
SSS sodium solute transporter superfamily id=4000326 bin=GWF2_Planctomycetes_42_9 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 534.0
  • Bit_score: 634
  • Evalue 7.20e-179
Sodium/glucose cotransporter (Na(+)/glucose symporter) similarity KEGG
DB: KEGG
  • Identity: 32.9
  • Coverage: 504.0
  • Bit_score: 299
  • Evalue 1.60e-78
Tax=GWF2_Planctomycetes_42_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 534.0
  • Bit_score: 634
  • Evalue 1.00e-178

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1638
ATGCTTAATGGTTTAAATCGCAGTAGTATCATTATGGAAAATTTTCATCTTTCAACACTGGATATACTGATTATCATAGCGGAGATACTGCTGGTGGTCATCATTGGTTTTGTAGCCGCGGGAAAAGTAAAAAGAACAGCAGAAGGATATTTCCTTGCATCCGGCAATATGCCCTGGTACCTGATCGGTGCCGCGTTTGTATCTACCTCTATTTCCAGCGAGCAGATTGTGGGAACTATTGGCGCTACCTATAAAGGAGGATTGGGTATTGCCAACTGGGAATGGTGGGCGCTGCCGACCTACCTGTTGACAATGATATTTTTTATTCCCCTGTACCTGCGCAATAAGATCATGACTGTTCCGGAACTGCTGAACCGTCGTTTCGGCCCAGCCTGCGGCGCTATATACAGCTTTGTGATATTGATCGGTTATATTTTTGTTTTTTTACCACCGGTCATTTACGGCGGCAGTATTACTTTAAGTGAGCTGACAGGCTGGGATCAGCGCTATGTGATGGCGGGAATAATAATTGTTACGGCAAGCTATACACTGGCAGGAGGCTTAAGTTCAGTGATGTGGACGGATGCCATTCAATGCATCATGCTGATCGGCGGTGGTGTGATATTTTATTTTGTTGCGCTGGATCATATTCCCGGTGGATGGACAGCCATGGTGGAAGCAGCGCCTGAAAGATTTCATCTTTACCAGCCGGCAGATAACCCCGAAGCTCCTTTTGCAGGATTGATATTAGCCACATTTGGCGTGTTTTTATTCTATCAGTCATCCAACCAGGTAATGATACAGCGTATACTCTCAGCCCGCAGCAGGTGGGATGGCGTAATGGGGCTGATATTTTCCGGCTTTATTAACCTTGTGCGCCCGCTGGTAACCTGCCTGGTGGGATTGATTCTTTACCATTGGCTGGAAGTAATGCGCCAGGGTCCTTCGCTGTTACCAGACAACCAGGATAAGGCCTTCCCGTTGGCTCTCCAGTTGTTTGCACCGTCAGGGTTGAAAGGAGTTATCCTGGCAGGATTTTTTGCAGCGGTAATGGCAAGTGTAAGTTCCTTGTCTAATTCCATCGCCACTATTTTTTCATTAGATGTTTATAAGAAGTTCATCAATAAAAATGCAGGAGATAAAAAATTAATTGTAGCCGGCCAGTTGTCAGGCGGAGCGGCGTTGGTCATTTCTTCGTTAATGGCTCCATTGGTAGGGAGTGTTGGACTATTCAAATACTTCCAGACGGGGGTAACGTACATGGCTACACCGTTCATTTCGGTATTGCTGATGGGCGTATTCTGGAAACGTGCCAATTATGCGGGCGCCATTGCCGGTTTGGTAGGTGGCGTTATTATCCAGATAGCATTAGGCGCTTTTTTACTGGCGGCTGATATAAAATTGCACTGGTTATATGTTGGAGCCATTGCAGAAGTATTGACAATATTATTGATCGTAATTGTTTCGTTGCGCACAACACCCCCGGTATTAGCAGATATTGACCGGTTTTTATGGAAATGGTCATGGGTGCAGAACATGGACGACAAATCAGCACAAAGACCCTGGTGGAAGCAGATTAAACTCTGGCTTGCTTTATATGCAATTGCATGGTGCTATATTTACTGGAGGTTTTGGTAG
PROTEIN sequence
Length: 546
MLNGLNRSSIIMENFHLSTLDILIIIAEILLVVIIGFVAAGKVKRTAEGYFLASGNMPWYLIGAAFVSTSISSEQIVGTIGATYKGGLGIANWEWWALPTYLLTMIFFIPLYLRNKIMTVPELLNRRFGPACGAIYSFVILIGYIFVFLPPVIYGGSITLSELTGWDQRYVMAGIIIVTASYTLAGGLSSVMWTDAIQCIMLIGGGVIFYFVALDHIPGGWTAMVEAAPERFHLYQPADNPEAPFAGLILATFGVFLFYQSSNQVMIQRILSARSRWDGVMGLIFSGFINLVRPLVTCLVGLILYHWLEVMRQGPSLLPDNQDKAFPLALQLFAPSGLKGVILAGFFAAVMASVSSLSNSIATIFSLDVYKKFINKNAGDKKLIVAGQLSGGAALVISSLMAPLVGSVGLFKYFQTGVTYMATPFISVLLMGVFWKRANYAGAIAGLVGGVIIQIALGAFLLAADIKLHWLYVGAIAEVLTILLIVIVSLRTTPPVLADIDRFLWKWSWVQNMDDKSAQRPWWKQIKLWLALYAIAWCYIYWRFW*