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SCN18_25_8_15_R2_B_scaffold_1260_15

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: 16603..17313

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VU69_DYAFD similarity UNIREF
DB: UNIREF100
  • Identity: 60.4
  • Coverage: 230.0
  • Bit_score: 274
  • Evalue 8.20e-71
LytTR family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 60.4
  • Coverage: 230.0
  • Bit_score: 274
  • Evalue 2.30e-71
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ACT96551.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.4
  • Coverage: 230.0
  • Bit_score: 274
  • Evalue 1.20e-70

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 711
ATGCTTACATGTATTGTTATTGATGATGAACCATTGGCATGTGATATACTGGAACAGTATATCAGCAAATCAGGAACTGTTAAGCTGAAAGCTGTATTTAATTCCGCTGTTCCTGCGTTGGATTTTTTAGCAACAAATGCAATCGATATTATTTTTCTTGATATTGAAATGCCGGAAATGAGCGGGATAGATCTTCTTAAGAAACTTGATAATCCTCCTGTTACCGTTTTTACTACTGCGTACAGAGATTACGCCTATGAAGGTTACGAGCTTGGCGTAATTGATTTCCTGCTTAAGCCGGTTTCTTTTGAAAGGTTTTTGCAGGCAATACAAAAGGCAAGAGATTTTTTTTCGCTTAAGGATCAGCATACTTCAATAGAAAATGATGACGGGCAGCTCGGCTCTGTTTTTGTGAAGAGTGGTGTACAAAAAATAAAATTGAACTTTGATGATGTTACACATATACAAGGGCTGAAAGACTATGCCATTATACATCATGCAGGTGGAAAAGTAGTAATAAAAGGCTCTGTGAAATCAATGCATGATATTTTTCCTGAGAAGCATTTTATGCGGGTACATAAATCCTTTATAGTAGCAAAGCATAAAATTGTACGCATTGAAAGAAATAAAATAATGCTGAAGAATTTCCAGGTGCCTGTAGGAAGAATTTATAAGGAGGCGCTGGAAAGCTTTTTGAAGAAGAACAACTAG
PROTEIN sequence
Length: 237
MLTCIVIDDEPLACDILEQYISKSGTVKLKAVFNSAVPALDFLATNAIDIIFLDIEMPEMSGIDLLKKLDNPPVTVFTTAYRDYAYEGYELGVIDFLLKPVSFERFLQAIQKARDFFSLKDQHTSIENDDGQLGSVFVKSGVQKIKLNFDDVTHIQGLKDYAIIHHAGGKVVIKGSVKSMHDIFPEKHFMRVHKSFIVAKHKIVRIERNKIMLKNFQVPVGRIYKEALESFLKKNN*