ggKbase home page

SCN18_25_8_15_R2_B_scaffold_1651_1

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: 3..659

Top 3 Functional Annotations

Value Algorithm Source
Tetratricopeptide TPR_2 id=1884098 bin=GWE2_Bacteroidetes_40_63 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 25.4
  • Coverage: 177.0
  • Bit_score: 63
  • Evalue 1.60e-07
integral membrane sensor signal transduction histidine kinase similarity KEGG
DB: KEGG
  • Identity: 29.2
  • Coverage: 144.0
  • Bit_score: 61
  • Evalue 2.90e-07
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 25.3
  • Coverage: 198.0
  • Bit_score: 65
  • Evalue 5.80e-08

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 657
GACAGTATGTTTAATATTAGTCAGGAATTATTAGAGAAATCAATTTTGCTAAAAAATGACTCCTTCCAGACAATTTCATATAGAATTTTTGGCAACTACTATTTTCTAAAAAGTGATTATACTAAAGCAATCGAAAAATATTTAGCTGGTATAAAAATAGCTGAGAACAACTCTAAGATAGATCACCTACTACCACAATTATACAATAATATTGGCTTCAACTATAGCATGTTAAACTACCATGATTTAGCTATGGAGTATCTAAGAAAAGGTGAAATTATTGGGAAGGAAAAAGAAAACAATCGGTCTTTGACATATATATATGAAAATATTGGGCTTCTTTATTTAAGTTTGGAGAATCCGGATTCTTCTCTTTATTATCTGAGTAAATCGGAAAATTCAAATTATTTATTTGGCAAGGAACGCTACGTTACCTCAAAGGATACGAATTATATCCGTGCTGCAATTTATATTGACTACGCAAAGAGTTATACACAACTCTACCTTAGAGATTCGTCGTTAAGGTTTTTGAATAAAGCGAAAAGTTATTTTGAAACAGCTATACAGTTTAGTCAGAGAACTGAAGATAACAGACATTTAGCCAGTTCATTCTATGAATACGGATATCTCTTTTTCAAGCTAAACTTATACGATTAA
PROTEIN sequence
Length: 219
DSMFNISQELLEKSILLKNDSFQTISYRIFGNYYFLKSDYTKAIEKYLAGIKIAENNSKIDHLLPQLYNNIGFNYSMLNYHDLAMEYLRKGEIIGKEKENNRSLTYIYENIGLLYLSLENPDSSLYYLSKSENSNYLFGKERYVTSKDTNYIRAAIYIDYAKSYTQLYLRDSSLRFLNKAKSYFETAIQFSQRTEDNRHLASSFYEYGYLFFKLNLYD*