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SCN18_25_8_15_R2_B_scaffold_1871_5

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: 5356..6027

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IB25_FLUTR similarity UNIREF
DB: UNIREF100
  • Identity: 67.8
  • Coverage: 227.0
  • Bit_score: 316
  • Evalue 1.80e-83
winged helix family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 227.0
  • Bit_score: 316
  • Evalue 5.00e-84
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEA42108.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 227.0
  • Bit_score: 316
  • Evalue 2.50e-83

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 672
ATGAAAGTGCTCCTAATAGAAGACGACAGGACATTAAACCAGAATATCAGCGAAGCTTTACAGGCAGAATCATCTGTTGTTACGGCTGTATATGATGGTTTTCTTGCTGAAAAAATTTTGCGCAAAGAGCAGTTTGACTGTATCATTCTTGATATCAGCCTACCCGGGAAAAACGGGTTTGAAATATGTAAAACCTTCAGGGAGTACAACAGTAGTACGCCTGTTATTATGCTCACCGCATTTTCCGAGCTGGATGATAAAGTACAGGGATTTAACTGCGGGGCCGACGATTATTTAACCAAACCTTTTTACATGCGTGAATTATTATTGCGTATTCATGCATTAACCAAAAGAACAGGCACTAATGAAGAGCATAAAGCGCTGATCAGTGCTGATGATATTACCATTACCCCGCACAACAAAAAAGTAACCCGCCAGGGACAGGAAATTCCGTTAACGCCAAGGGAATTCCAGATATTAATGAAACTGGTCTCGAAAAAAGGAGAACTGGTCTCAAAAAAAGAATTAATAAAAGAGATATGGGGAACGCATCTGGATGTGAATACCAACACCATAGAAGTATATATCAACTTTCTCCGGAATAAAATTGATAAACCGTTCGGGAAACAAAATATTAAAACCAAAACCGGGTATGGGTATTACTTTGAATAG
PROTEIN sequence
Length: 224
MKVLLIEDDRTLNQNISEALQAESSVVTAVYDGFLAEKILRKEQFDCIILDISLPGKNGFEICKTFREYNSSTPVIMLTAFSELDDKVQGFNCGADDYLTKPFYMRELLLRIHALTKRTGTNEEHKALISADDITITPHNKKVTRQGQEIPLTPREFQILMKLVSKKGELVSKKELIKEIWGTHLDVNTNTIEVYINFLRNKIDKPFGKQNIKTKTGYGYYFE*