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SCN18_25_8_15_R2_B_scaffold_2414_1

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: 41..493

Top 3 Functional Annotations

Value Algorithm Source
transcription activator effector binding id=7716925 bin=BACIGN_2 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP similarity UNIREF
DB: UNIREF100
  • Identity: 60.7
  • Coverage: 145.0
  • Bit_score: 189
  • Evalue 1.30e-45
transcription activator effector binding similarity KEGG
DB: KEGG
  • Identity: 57.7
  • Coverage: 142.0
  • Bit_score: 177
  • Evalue 1.40e-42
Transcription activator effector binding {ECO:0000313|EMBL:ACU60344.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.7
  • Coverage: 142.0
  • Bit_score: 177
  • Evalue 7.20e-42

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 453
ATGATAAAACAAAATGAAAATGTAATTATTGCCGGGTTGTCAATCAGAACGACCAATGAAAATGGGCAATCAGCCCATGACATTCCTGCCCTATGGCAGCGCTTTTTTGCAGAAGATATGCTGAATAAAATACCCGGTAAAATTGATGATACGCTGTATTGTATATACACCGATTATGAAAAAGATCATACCAGTCCATATACCACCCTGCTCGGTTGCCGCGTTCGGGTGGAAGTAAATGAACCAGGCATAACAACAAAAGTTTTTACCGGGGATAAATATTATGTATTTATTGCCAAAGGGGCTTTGGACAATGGCATAGTTTATAAAGAATGGCTGAAAATATGGAATGCAGGCATCGAGCGTTTATATACTACAGATATTGAGATATACGGTGAAAGAGCCCGGGATAAATTAAATGCTGAAATTCCGATATTAGTAGCCGTAAAATAA
PROTEIN sequence
Length: 151
MIKQNENVIIAGLSIRTTNENGQSAHDIPALWQRFFAEDMLNKIPGKIDDTLYCIYTDYEKDHTSPYTTLLGCRVRVEVNEPGITTKVFTGDKYYVFIAKGALDNGIVYKEWLKIWNAGIERLYTTDIEIYGERARDKLNAEIPILVAVK*