ggKbase home page

SCN18_25_8_15_R2_B_scaffold_2426_4

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(6905..7528)

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator n=1 Tax=Niabella aurantiaca RepID=UPI00037CFAF9 similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 207.0
  • Bit_score: 317
  • Evalue 5.70e-84
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 73.4
  • Coverage: 207.0
  • Bit_score: 300
  • Evalue 3.50e-79
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADQ19055.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 207.0
  • Bit_score: 300
  • Evalue 1.70e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 624
ATGGATAAAATAAAAATACTGGTAACAGACGATCACCCGATGGTGCTGGAAGGAATGCAGACGATGCTTTCGCAGATAGGATTTGTTGTTATAACCGGGCTTGCCCGCAATGCTTACGAAGCGATGGAGCTGATAAAAGCAAACCCGCCGCATATTGTTATTACAGATATCAGTATGCCGGAAATAAGCGGTATTGAGTTTGCAGCAAAGATCAAAAATGAATACCCGGGAGTGAAGATCATTGCCATGAGTACATTTAACGAGCGTAGTTATATTTCTCAAATGGTGCAAAACGGGGCGTCGGGCTATATACTCAAAAGCGCGGCTAAGGAAGAAATAGAAGAAGCCATACTTACCGTATACGAAGGGAAATTATATATGAGCGTGGAATTGGAACTGAACAAAAAGGAACAACAGGAAATAAATAAAATACCCATACTCACCAGCCGCGAAAAAGAAGTGCTGGCATTGATAGCCGAAGGCTTTACCAATCCGCAAATTGCTGCAAAATTATTTGTAAGCCCTTATACGGTTGACAGCCACCGCAAAAACCTGCTTACCAAATTTGAAGTGAACAATACAGCCGGCTTGATTAAACTAGCTGCCAAATATGGATTGGTATAG
PROTEIN sequence
Length: 208
MDKIKILVTDDHPMVLEGMQTMLSQIGFVVITGLARNAYEAMELIKANPPHIVITDISMPEISGIEFAAKIKNEYPGVKIIAMSTFNERSYISQMVQNGASGYILKSAAKEEIEEAILTVYEGKLYMSVELELNKKEQQEINKIPILTSREKEVLALIAEGFTNPQIAAKLFVSPYTVDSHRKNLLTKFEVNNTAGLIKLAAKYGLV*