ggKbase home page

SCN18_25_8_15_R2_B_scaffold_2128_11

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(8273..11455)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor plug n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YBM0_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 43.0
  • Coverage: 1082.0
  • Bit_score: 927
  • Evalue 8.00e-267
Putative TonB-dependent receptor {ECO:0000313|EMBL:GAO44115.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.4
  • Coverage: 1066.0
  • Bit_score: 969
  • Evalue 3.40e-279
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 42.5
  • Coverage: 1061.0
  • Bit_score: 881
  • Evalue 1.40e-253

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3183
ATGAAAAAACTGCTTTTTCTTCCCATAATTTTAAGTTTCAGTATACTTGGCGCAGCAGCACAAATTACAGGATCGGTTACCAATTCCGCAGATGGAAAACCTTTATCTGGTGTAAGCATCTCAGTAAAGCATAAATCTATAAGCACAACTACCAACAAAAGCGGAGCCTTTGCAATTGGGGCTGTCTTGTCTGATACGCTACACATCACGCATATTGGTTATAAAGAACTGTACCTCCCGGTTGTAACACCGGCTGCTTTGCATATTATGCTGACAACAGATACGCTCGCGCTGCAGGAAGTTTTTGTTAACACGGGTTTTCAGCAATTACCACGCGAACGTGCTACAGGATCTTTTACCTTTATTGATAATAAAACCCTCAACCTGCAGGTAGGCACTACTATTCTCGACAGGCTGAATGGTATAGCATCCGGCGTTTTATTTGATCCATCCCGATATAAAACCGATAATAAAAAGCTTGACTTTAATGTTCGTGGGCTCTCTACTATCAATGGCAACCAGGATCCATTGATCATTCTGGATAATTTCCCTTACGAAGGTGATCTTGCAAGTATCAATCCTAACGATGTAGACAATATCTCCATCCTGCGCGATGCCGCAGCCGCATCAATATGGGGTAGCCGTGCAGGCAATGGTGTAATTGTTATTACCACCAAGAAAGGTAAATTCAACCAGCCATTACGGGTTGAGTTCAATGCTAATGTTGTTGTAACAGGTTCCCCGGATCTGTATTACCTGCCCCAGATAAATTCCGCAGATTATATTGACGTGGAAAAAATGTTGTTTGATAACGGATACGTAAGTGGTTTAAGTCACCTGGGCATATCACCGGCAATAAAAATCTTTCAGCAACAAAAAGATGGACTTATTTCCGAAGCTGAAGCCACCACAGCCATTAATCAGTTAAAGGCCCATGATGCGCGGGAAGATTACAATCGGTATCTCTATCAGCATGCAGTATTACAACAGTATGCCGTGAACCTGAGAGGAGGTAGTGAAACGCTGGCATGGTTGGTTAGTGCCGGGTATGACAGGAACATAGGAAGCCTTTCTGAAAAAAATGATCGCCTGACGCTCAGGATGGAAAACAGCTATCGGCCTTCATCAAAGATCACCATACAACTTGGCGCTCTTTATATAGCTACCAATAGCCTCAGTGGTAAACCGGGCTATAGTGATATCACCATCAATTACAGGCATATCCCCTATCTGTCGCTAGCAGATGCCGCAGGCAACGCCTTACCTGTTCCTGTACAATACCGCGATGAATTTACAGACACTGCAGGTGGAGGATACCTGCTCGACTGGAAATATTATCCGCTTGAAGACTATAAGCACAACCGCATTGCAACAAATGGCGGTAGCCTTTTGGCAAATATAGGTCTGCAATATCAGCTTTTTAAAGGTATGTCATTCGATGTACGCTATAACTACCAGCGCCAGCAAACAAACACAGATAATATCGCTGATTTGCAGAGTTATTATACCCGGAACCTCATCAATGACTTTAGCCAGGTAGATTATAATACCGGCATTATTAATTATATTGTTCCGTCCGGGGCAATATTAAGTCGTAACCAATCCGTAGTTCAGGCGCATAATGGTCGTGCACAATTTAGCTATAACAATAATTTCGGTGGAAGTTTTGAAAATCACAGCCTGTCAGTAATTGCAGGTGCAGAATTACGCCAGACCCGCATTACGGGTAACGGACAAACATTATATGGTTATGATGAAAATATCCTTACAACCGGAACAGTGGATTATAAAACGGCCTATCCGACCTTTTCAGGCGCCTTATCTTATATTCCTGATGGTATTTCGCTCTCGGAATCCCTTAACCGTTATGTTTCTTTTTATGGTAATGCGTCCTGGACATTAAAAGGTAAGTACACGCTTTCAGGTTCTGCACGGCGCGATGCTTCTAACCTGTTTGGTGTATCAACCAATGACAAATGGAAACCCTTCTGGTCTGGCGGTGCAGCCTGGAATATCGCTTCAGAAAATTTCTACCATGCCTTATGGTTGCCTCAACTGCGGCTACGTACCAGCTTCGGCTACAGTGGTACTGTTGACCCATCTAAATCAGCAGTTACCGTACTGGAAACTGTAGGCAATAACCGTTTTTCAGGCTTGCCCGGATTAAGAGTTGCACAATTCGCAAACTCAGCATTGCGCTGGGAAAAAGTGGCCACTACCAATATAGGATTGGACTTTGCATTAAAAAACGCGAGGCTTAGTGGCACAATAGAATGGTATAATAAAAAAGGAATTGATCTGTTTGGTCCTTCTCCTGTTGATTATACTGCAGGGCTGGCAAGTAAAACGATCGTACGTAATATCGCCGATATGCAGGCCCGTGGCATGGATATAAATTTAAACTGGCGCATTTTTGATAAAAAATTCAGATGGAATACGGGCTTTTTGCTAAGCCTCTATCGTGATAAAACCACATCCTATTACATGCCGGAAGGTGCGATATATGCACCTACCGGGGGCAGAGAGGTTTCTCCGCTGACAGGTAAACCACTTCATGCAATATTAAGCTATGCATTTGCCGGACTTGACCCACAGACCGGCGATCCGCAGGGTTACCTTAACAAAACCCTGAGTAAGGATTATTATGGGATATATGCTGCGGCAAAAAGTCCTGACAGCCTTTTATACAACGGCACGGCCAGTCCGCGGTATTACGGTGCATTATCAAACAGTATTACCTGGAAGGGGTTTAGCATCTTCTTTAATATCACTTATAAACTCGGTTACTATTTTCGGCGGGAGTCTATCAGCTACGAGCAGCTTTACAGCAGCGGAATTGGTCATGGAGATTTTGCTAAGCGCTGGCAGCAACCCGGTGATGAAAATCATACAAATATTCCTTCTCTGCAATACCCGCTCGATTATTACCGCGATGCATTTTTTTTAAGCTCCAATGTTACAGTTTCCCGGGCTGACCATATTCGTCTTCAGTTCGTTAATCTAAGTTATGAGCTTGCTGAATCCTTGCTTGGAAAAACCGGGTGGCAGTCTCTTCAACTATATCTTAACGCATCAAACCTTGGCGTTCTGTGGAAAGCTAACAAGAATGGATTAGACCCGGATTATCCAACCAGTATCCCTGCATCCCGCACGTGGGCCATTGGCTTACGTGCAAATTTTTAA
PROTEIN sequence
Length: 1061
MKKLLFLPIILSFSILGAAAQITGSVTNSADGKPLSGVSISVKHKSISTTTNKSGAFAIGAVLSDTLHITHIGYKELYLPVVTPAALHIMLTTDTLALQEVFVNTGFQQLPRERATGSFTFIDNKTLNLQVGTTILDRLNGIASGVLFDPSRYKTDNKKLDFNVRGLSTINGNQDPLIILDNFPYEGDLASINPNDVDNISILRDAAAASIWGSRAGNGVIVITTKKGKFNQPLRVEFNANVVVTGSPDLYYLPQINSADYIDVEKMLFDNGYVSGLSHLGISPAIKIFQQQKDGLISEAEATTAINQLKAHDAREDYNRYLYQHAVLQQYAVNLRGGSETLAWLVSAGYDRNIGSLSEKNDRLTLRMENSYRPSSKITIQLGALYIATNSLSGKPGYSDITINYRHIPYLSLADAAGNALPVPVQYRDEFTDTAGGGYLLDWKYYPLEDYKHNRIATNGGSLLANIGLQYQLFKGMSFDVRYNYQRQQTNTDNIADLQSYYTRNLINDFSQVDYNTGIINYIVPSGAILSRNQSVVQAHNGRAQFSYNNNFGGSFENHSLSVIAGAELRQTRITGNGQTLYGYDENILTTGTVDYKTAYPTFSGALSYIPDGISLSESLNRYVSFYGNASWTLKGKYTLSGSARRDASNLFGVSTNDKWKPFWSGGAAWNIASENFYHALWLPQLRLRTSFGYSGTVDPSKSAVTVLETVGNNRFSGLPGLRVAQFANSALRWEKVATTNIGLDFALKNARLSGTIEWYNKKGIDLFGPSPVDYTAGLASKTIVRNIADMQARGMDINLNWRIFDKKFRWNTGFLLSLYRDKTTSYYMPEGAIYAPTGGREVSPLTGKPLHAILSYAFAGLDPQTGDPQGYLNKTLSKDYYGIYAAAKSPDSLLYNGTASPRYYGALSNSITWKGFSIFFNITYKLGYYFRRESISYEQLYSSGIGHGDFAKRWQQPGDENHTNIPSLQYPLDYYRDAFFLSSNVTVSRADHIRLQFVNLSYELAESLLGKTGWQSLQLYLNASNLGVLWKANKNGLDPDYPTSIPASRTWAIGLRANF*