ggKbase home page

SCN18_25_8_15_R2_B_scaffold_2133_1

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(104..1081)

Top 3 Functional Annotations

Value Algorithm Source
Sialidase, exo-alpha-sialidase n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GR46_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 37.0
  • Coverage: 330.0
  • Bit_score: 218
  • Evalue 5.60e-54
Uncharacterized protein {ECO:0000313|EMBL:ETZ19165.1}; Flags: Fragment;; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.9
  • Coverage: 294.0
  • Bit_score: 241
  • Evalue 8.70e-61
exo-alpha-sialidase similarity KEGG
DB: KEGG
  • Identity: 33.6
  • Coverage: 330.0
  • Bit_score: 176
  • Evalue 7.00e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 978
ATGATTAACTATAAAAGCCTTTTATACAGTATATATTTATGCTTAACTGTTGCGGTGGTTGGTTGTCTTAAAGATGATACTGATTTGCCGGAGCAAAATGCTGAAGACTATTACCAGGTATATATGCCTTTGGCTGTGCAGAACCCAATAGCAGTTAACCTGAAATTTGGCAGCGAAGCGCAGGCATTTGTTTATGGAGCGAATTATGGTGGATTGAATTATCCTGACAAGGATATACAGGTTGATTTTTCAGTTGCATCAAACCTGGTTGATTCGTTTAACCTTCAGTATGGTACACAATATGAATTACTACCGCAAAGTGCATATTCATTAGCAGCTACTTCAGCTGTAATTCCTGCTGGTACATTAGCAACACAACCTTTAGATATAAAAGTGATATCCGAAGGAAATATGGATATATTTAAATCTTATCTCCTGCCGGTAAGTTTATCTTTAAAGAGCAACGATTTTAAGATCAACGAAAACCTTAAAACAACTTTTTATGTCGTAACGGCTTCGCTTTCTTTTGATGATTTCCAGGAATATAACAGAAGCAACTGGGAAGTAATAGAAGTATCATCTGAAGAACCTGCTGAAGGCCCGGATAATGGAGGTCTGGCAATTCATACGCTTGATGGTAAAACAAGTACTTTCTGGCATTCTGCCTGGGCTAATTCATCCCCTGGTCCTCCGCATTATATTGCGATTGATATGGGCGAAACAAAAACTTTGCATGGCTTTTCTTTTACAGGCAGGCAAAGCAGTAATGCAGGCAAACCCCAAACAATAACTATTGAAACCAGCATGAATGGTACAGATTGGGAAACTGCACAAACATTTACTTTACAAAATACGAACAGCGAACAAAAATTTTTCCTGACCTCAGGATTTAAAGAAGCGAAGTATTTTAAAATGATTGTTACCGCTATGTTTGGCGGAGCTAATTATACACATCTGGCAGAGTTAAAAGCTTTTTAA
PROTEIN sequence
Length: 326
MINYKSLLYSIYLCLTVAVVGCLKDDTDLPEQNAEDYYQVYMPLAVQNPIAVNLKFGSEAQAFVYGANYGGLNYPDKDIQVDFSVASNLVDSFNLQYGTQYELLPQSAYSLAATSAVIPAGTLATQPLDIKVISEGNMDIFKSYLLPVSLSLKSNDFKINENLKTTFYVVTASLSFDDFQEYNRSNWEVIEVSSEEPAEGPDNGGLAIHTLDGKTSTFWHSAWANSSPGPPHYIAIDMGETKTLHGFSFTGRQSSNAGKPQTITIETSMNGTDWETAQTFTLQNTNSEQKFFLTSGFKEAKYFKMIVTAMFGGANYTHLAELKAF*