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SCN18_25_8_15_R2_B_scaffold_2133_5

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(7419..8003)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XXN2_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 41.3
  • Coverage: 179.0
  • Bit_score: 128
  • Evalue 4.60e-27
Uncharacterized protein {ECO:0000313|EMBL:KIA91086.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.3
  • Coverage: 176.0
  • Bit_score: 134
  • Evalue 9.00e-29
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 41.3
  • Coverage: 179.0
  • Bit_score: 128
  • Evalue 1.30e-27

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 585
ATGCAAGTACAAACTGAAGGTTATGAAAAAGTGATAGCAGATGATACAGGTGCAATACTTTTGAAAACAACTTTTGAAAATTTATATAACAGCTACTTTGATAAGTTGTTTGAATATGGATGCAGATTACATAATGATCAGCATCTTATCCAGGATTGCATCCAGGATGTTTTTATAAAGCTGTGGAACAAACGGCATCAGCTTTCTAACATAAAAAATATTAAGAGCTATCTTTTTATCGCTTTAAAAAATACTATTTTAAATAAAGCAGCATCTTCTACGCATAAATTACTCCAGGGTGGCGATACCCCATTTGAATTGAGTTATATAATAGAGGAACAGGCTTCTAAAGGAGAAATATCAGCAGAAACACTTAGTGGCTTATATATTGCCTTAAATAATCTAACAGACAGGCAAAAGGAGTGTATTTACCTGAGATATTTTGAGGGGCTTGGTTATGAAGAAATTTCAGACTTGCTCAACATATCTACCAAAGCCACTTATAAGCTGGCTGCCAGGGCCTTAGAGTGCCTTAAAGCTAATATTCCTGAATCGTTATTTGTTCTGTTTTTTTTGTTATTATAA
PROTEIN sequence
Length: 195
MQVQTEGYEKVIADDTGAILLKTTFENLYNSYFDKLFEYGCRLHNDQHLIQDCIQDVFIKLWNKRHQLSNIKNIKSYLFIALKNTILNKAASSTHKLLQGGDTPFELSYIIEEQASKGEISAETLSGLYIALNNLTDRQKECIYLRYFEGLGYEEISDLLNISTKATYKLAARALECLKANIPESLFVLFFLLL*