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SCN18_25_8_15_R2_B_scaffold_2544_3

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(1944..3218)

Top 3 Functional Annotations

Value Algorithm Source
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EC72_RUNSL similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 424.0
  • Bit_score: 699
  • Evalue 1.10e-198
xylose isomerase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 424.0
  • Bit_score: 699
  • Evalue 3.10e-199
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:AEI47603.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 424.0
  • Bit_score: 699
  • Evalue 1.50e-198

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1275
ATGCAGGTAGAGCAATACAGTATAGACAGTCATAATGAAGCTTTGCTGAAAGAACACAAACGCAGGCTGGACTATATTACATCAACAGTTAAAGACGCAGAAAAAATTATCGCTACACTTAAAGCGTTCCAGATAGCTATACCAAGCTGGGCTTTGGGAACCGGTGGTACAAGGTTCGGCCGTTTTTCAGGCGGCGGTGAGCCTCGTAATCTTGAAGAAAAGATTGAAGATATTGGTTTGCTGCATAAACTTAATCAGTCCAGCGGCGCTATATCATTGCATATACCCTGGGATATCCCGGAAAACGCTTCACATATTAAAGCGCTGGCGGTACAAAATGGTTTGCGTTTTGATGCGATGAATTCTAATACATTCCAGGATCAGCCCAACCAGGAACTGACATATAAATTCGGTTCATTACAAAATGTAAATAAAGCCATTCGTCAGCAGGCAATTGATCATAATATTGAAGTAATAAAATACGGCGTTGAATTAGGATCAACATCGTTGACCGTTTGGCTGTCGGATGGTTCATGTTTTCCTGGTCAGTTAAATTTCAGGGAAGCATTTCAGCACACATTAAGCGGCTTGCAGGATATATACAAAGCCCTGCCGGAGGATTGGAAAATTTTTGTTGAGTATAAAGCCTTCGAACCAAATTTCTATTCCACTACTGTTGGAGATTGGGGACAATCTTATTTATATGCCAGCAAGCTTGGGCCTAAAGCATATACCCTGGTTGATCTTGGTCACCACCTTCCTAATGCCAATATTGAACAGATTGTTGCTTTGTTGCTGATGGAAGGAAAGCTCGGTGGTTTCCATTTTAATGATTCCAAATACGGAGATGATGATTTAACAACCGGTAGCATTAAACCTTATCAGTTATTCCTCATTTTTAACGAGCTCGTTGAAGGCATGGACTCCAAAGGCATGGATCATGTTACGGATATGGGCTGGATGATTGACGCGTCGCATAACGTAAAAGATCCGTTAGAGGATTTATTGCAATCTGTGGAAGCGATTATGTTGTCGTATGCGCAAGCATTGTTTGTTGACAGGAAAGCATTGAAAGAAGCGCAGCAGCATAATGATGTGGTAGCTGCGCAGGAGATATTACAAAACACTTTCCGCACAGATCTTCGCCCGCTTGTTGCCGAAGCAAGATTACAAGCCGGTGGTGTGCTTGACCCGGTTGCTTTCTTCCGCAAAGAAAAAGTAAGAGAAAAATTAATTAAGAACCGTGGAGCGAAAACCGTAGCGACAGGATTGTAG
PROTEIN sequence
Length: 425
MQVEQYSIDSHNEALLKEHKRRLDYITSTVKDAEKIIATLKAFQIAIPSWALGTGGTRFGRFSGGGEPRNLEEKIEDIGLLHKLNQSSGAISLHIPWDIPENASHIKALAVQNGLRFDAMNSNTFQDQPNQELTYKFGSLQNVNKAIRQQAIDHNIEVIKYGVELGSTSLTVWLSDGSCFPGQLNFREAFQHTLSGLQDIYKALPEDWKIFVEYKAFEPNFYSTTVGDWGQSYLYASKLGPKAYTLVDLGHHLPNANIEQIVALLLMEGKLGGFHFNDSKYGDDDLTTGSIKPYQLFLIFNELVEGMDSKGMDHVTDMGWMIDASHNVKDPLEDLLQSVEAIMLSYAQALFVDRKALKEAQQHNDVVAAQEILQNTFRTDLRPLVAEARLQAGGVLDPVAFFRKEKVREKLIKNRGAKTVATGL*