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SCN18_25_8_15_R2_B_scaffold_3211_7

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: 6213..7832

Top 3 Functional Annotations

Value Algorithm Source
(R)-citramalate synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T700_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 81.9
  • Coverage: 504.0
  • Bit_score: 847
  • Evalue 4.10e-243
2-isopropylmalate synthase {ECO:0000313|EMBL:KIC90606.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.5
  • Coverage: 503.0
  • Bit_score: 870
  • Evalue 8.30e-250
(R)-citramalate synthase similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 504.0
  • Bit_score: 847
  • Evalue 1.20e-243

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1620
ATGCTGGCAGCCACAGGGAAGGACTTATTAAATATCTTTAATTATACAATGACATCCCAGGACATAACGGTTACCAGTTCCCCTCTCCTTAGAAAAGGAACTGGGAAAGAGGTTAGATACATTGAAATAATGGATACAACCCTGCGTGATGGTGAACAAACCAGCGGTGTATCTTTTTCTGCCTCAGAAAAACTAACGATAGCCCAGTTATTGCTTACTGAAGTAAAAGTTGATCGTATTGAAATTGCTTCAGCCCGTGTATCAGAAGGTGAATTTGACGCAGTGAAAAAGATTACTGGCTGGGCTAAAGCGAATAATTATTTACATAAAATTGAAGTGCTCACTTTTGTGGATGGCGATACATCTATTGAATGGATGCAGAAAGCCGGTGCTAAAGTGATGAACCTGTTAACGAAAGGCTCGCTCAATCATCTTACACATCAATTAAAGAAAAAGCCTGAAGAACATTTTGCTGATATAGCCGCGGTTATTGCATTGGCTAAAAAGAAAGGTATTGAAACCAATGTATATCTTGAAGACTGGAGCAATGGTATGCGCCATTCAAAAGATTATGTGTTTCAATATTTAGACTTTATCGCTACACAACCCGTTAAAAGGGTTATGCTTCCTGATACACTGGGTATACTGATTCCTTCGGAAGTATATGAATTTGTATCTGAAATTACAGCACGCTATCCTGAAATACATTTTGATTTTCACGGACATAACGATTATGATCTTGGCACAGCTAATATACTTGAAGCAATAAGAGCCGGTGCGCATGGCTTGCATCTTACGGTAAACGGTATGGGCGAAAGAGCGGGGAATGCACCGCTTGCCAGCGCTATAGCAGTATTGCATGATTTTATGCCGGATATTAAAACTTCGGTAGTTGAAAAGTCATTGTATACTGTAAGCAAACTGGTAGAAACTTTTTCCGGTTTTCGTATCCCTGCCAATAAACCCGTTGTTGGGGAAAACGTATTTACACAAACCGCGGGCATACATGCAGACGGCGATAAGAAAAACAAATTGTACTTCTCCGACCTGATGCCGGAGCGCTTCGGCCGCCAGCGCAAATATGCCCTGGGTAAAACAAGCGGAAAAGCAAATATTGAAAATAACCTGCAGCAATTAGGTATACAGCTTTCTGATGCGGACCTTAAAAAAGTAACGCAGCGTATTATTGAACTGGGTGACAGGAAAGAGGTAGTAACACAGGCTGACCTGCCTTATATCATATCTGATATACTCGATAATGCTATCCAGGATAAAGTAAGTATTGATAATTATGTGCTCACGCATTCAAAGAGTATGCATCCTTCTGCAACCGTAAGGGTTACCGTGCATGGTGATTCATACGAAGAGCATGCGCAGGGCGATGGACAGTATGATGCGTTTATGAATGCATTGAAAAAGGTATATAAGCAAAGAAAACAGGAGTTGCCGGTGCTAACAGATTATATGGTGAGGATACCTCCGGGCGGTAAAAGTGACGCATTGTGCGAAACCGTAATTACCTGGAAGCATAATAACAAAGAGTTTAAAACCCGTGGGCTCGATAGTGACCAGACGGTTTCAGCGATAAAGGCAACGCAGAAGATGCTGAATATGGTGTAA
PROTEIN sequence
Length: 540
MLAATGKDLLNIFNYTMTSQDITVTSSPLLRKGTGKEVRYIEIMDTTLRDGEQTSGVSFSASEKLTIAQLLLTEVKVDRIEIASARVSEGEFDAVKKITGWAKANNYLHKIEVLTFVDGDTSIEWMQKAGAKVMNLLTKGSLNHLTHQLKKKPEEHFADIAAVIALAKKKGIETNVYLEDWSNGMRHSKDYVFQYLDFIATQPVKRVMLPDTLGILIPSEVYEFVSEITARYPEIHFDFHGHNDYDLGTANILEAIRAGAHGLHLTVNGMGERAGNAPLASAIAVLHDFMPDIKTSVVEKSLYTVSKLVETFSGFRIPANKPVVGENVFTQTAGIHADGDKKNKLYFSDLMPERFGRQRKYALGKTSGKANIENNLQQLGIQLSDADLKKVTQRIIELGDRKEVVTQADLPYIISDILDNAIQDKVSIDNYVLTHSKSMHPSATVRVTVHGDSYEEHAQGDGQYDAFMNALKKVYKQRKQELPVLTDYMVRIPPGGKSDALCETVITWKHNNKEFKTRGLDSDQTVSAIKATQKMLNMV*