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SCN18_25_8_15_R2_B_scaffold_3983_2

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: 551..1111

Top 3 Functional Annotations

Value Algorithm Source
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:ACU59007.1}; EC=5.1.3.13 {ECO:0000313|EMBL:ACU59007.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.1
  • Coverage: 186.0
  • Bit_score: 238
  • Evalue 5.50e-60
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PSW8_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 58.1
  • Coverage: 186.0
  • Bit_score: 238
  • Evalue 3.90e-60
dTDP-4-dehydrorhamnose 3,5-epimerase similarity KEGG
DB: KEGG
  • Identity: 58.1
  • Coverage: 186.0
  • Bit_score: 238
  • Evalue 1.10e-60

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 561
ATGCCGTTTAATAAAACCGATATCCCCGGTCTGGTGTTATTTCAACCAAAAGTTTTTGAGGATAGCAGGGGATACTTTTTTGAAAGTTTTAATAAAGCAGTTTTTGCAGCAGAAGGATTAGCATTTGATTGGGTACAGGATAACGAGTCGTATTCAGGCTATGGTGTAATCCGTGGATTACATTTTCAAAATCATCCTAAAGCACAAGCTAAGTTAATTCGGGTGCTGGAAGGAAAAATTTATGATGTTGCAGTAGATATCCGCGAAGGATCACCAACATTCGGCAAATGGTTTGGCGTGGAACTTTCTTCCGAAAACAAATTGCAATTATTAATTCCCAAAGGTTTTGCGCATGGCTTTTCCGTGATAAGTGAAACTGCTAAAGTGCTGTATAAATGCGATAATTTATATGATAAGAATGCGGAAGGGGGTATTATGTATAATGATGCAGATTTAAATATTGACTGGAAAATTCCGGCTGATAAAAGCATTATATCAGACAAAGATTTACATCATCCTTCACTGAAGGATTGCAACACTCAATTTATATTTGAAGAATAG
PROTEIN sequence
Length: 187
MPFNKTDIPGLVLFQPKVFEDSRGYFFESFNKAVFAAEGLAFDWVQDNESYSGYGVIRGLHFQNHPKAQAKLIRVLEGKIYDVAVDIREGSPTFGKWFGVELSSENKLQLLIPKGFAHGFSVISETAKVLYKCDNLYDKNAEGGIMYNDADLNIDWKIPADKSIISDKDLHHPSLKDCNTQFIFEE*