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SCN18_25_8_15_R2_B_scaffold_3988_11

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(6813..7583)

Top 3 Functional Annotations

Value Algorithm Source
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.3
  • Coverage: 254.0
  • Bit_score: 369
  • Evalue 2.90e-99
Tryptophan synthase alpha chain n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQM7_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 71.3
  • Coverage: 254.0
  • Bit_score: 369
  • Evalue 2.00e-99
tryptophan synthase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 71.3
  • Coverage: 254.0
  • Bit_score: 369
  • Evalue 5.80e-100

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 771
ATGAGCAGAATACAACAATTATTTAAGCAAAAGCAAAACAATGTTTTGAATATCTACTGTACTGCGGGTTATCCCACATTGAACAGTACAATAGAAGTGATGGAAGCATTGCAGGCTAATGGCGCTGATCTTATTGAATTAGGCATACCGTATAGTGATCCGCTGGCGGATGGGCCGGTTATACAGGAAAGCAGCGGAGTAGCTTTGCAAAACGGCATGACCATTAAAATACTGATCAGCCAGTTGCAGCAAATGCGCAAAACCATTCATGTGCCGGTAATCCTGATGGGCTATGTTAATCCTGTTTTACAATATGGCTTTGAAAAATTTTGTAAGGATGTGGCAGCAGCAGGCATTGATGGATTGATTTTGCCTGATGTGCCGATGCGGGAATTTGAAACAGAGTATGGCGCCATAACCAAAAAGTATGGACTCGATTTTATTTTCCTGGTCACGCCGGAAACATCTGAGGAGCGTATAAGAAAGATTGATAAGCTGAGCACTGGTTTTATTTATGCCGTTTCATCTTCTTCAACAACAGGTAAAGACAAGAACTTTAACGATGTGGAAGCATACCTGGAGCGGTTAAAAGCAATGAACCTGGATAACCCGGTATTGGTGGGATTTGGTATAAAAGATAAAGCAACTTTTCAATCAGCATGTAATTATGCCAACGGGGCTATTATAGGCAGCGCTTATATAAAAGCTTTGCAGCAAAACAATGATATAAAACAGGCAACAAAAAAATTTCTGGAAGAAGTATTGCAGTAA
PROTEIN sequence
Length: 257
MSRIQQLFKQKQNNVLNIYCTAGYPTLNSTIEVMEALQANGADLIELGIPYSDPLADGPVIQESSGVALQNGMTIKILISQLQQMRKTIHVPVILMGYVNPVLQYGFEKFCKDVAAAGIDGLILPDVPMREFETEYGAITKKYGLDFIFLVTPETSEERIRKIDKLSTGFIYAVSSSSTTGKDKNFNDVEAYLERLKAMNLDNPVLVGFGIKDKATFQSACNYANGAIIGSAYIKALQQNNDIKQATKKFLEEVLQ*