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SCN18_25_8_15_R2_B_scaffold_4454_1

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: 3..1976

Top 3 Functional Annotations

Value Algorithm Source
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y2E0_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 657.0
  • Bit_score: 1029
  • Evalue 0.0
Multidrug transporter AcrB {ECO:0000313|EMBL:ETZ23893.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.9
  • Coverage: 657.0
  • Bit_score: 1036
  • Evalue 0.0
hydrophobe/amphiphile efflux-1 (HAE1) family transporter similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 657.0
  • Bit_score: 1029
  • Evalue 0.0

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1974
TTGTTTGCATTAGTGCTCGCTATTGGTATTGTGGTAGACGATGCGATTGTGGTAGTAGAAGCCGTACACGCAAAAATGGAAAAGGAAAACCTGAACCCGCTTGCTGCAACCAAAGCAGCCATGAAAGAAATTGGCGGCGCTATCATTGCCATTACGCTGGTAATGGCGGCGGTATTTGTCCCGGTTTCGTTTATGTCTGGTCCTGTGGGTGTTTTCTATCGGCAATTCTCTGTTACAATGGCCACTTCCATTATTTTATCAGGCATTGTGGCACTAACGTTTACGCCTGCACTCTGTGCCATCATTCTTAGAAATACACATGGCAAGAAAAAGAAAAATATGCTGTCCCGGTTTTTGGATTCATTTAATAATGGATTTAACAGGCTGTTGGGTAAATACAAGAACATTGTTGCTAAAATCGCCAACAGGAGAGTAGTAACTTTCCTGGCATTGATCGCTTTTTGTGCCGGAACATGGTTTATAAGCTCTTCCATTCCTTCAGGATTTATACCTAATGAAGACCAGGGTGTGTTTTATGCTATTATACTTACGCCGCCGGGCTCAACCCTTGAAAGAACAAACCAGGTTGCGCTTGATCTGCAAAAGATAGCAGGAAAAATGGAAGATGTTAAATCCGTTTCTTCCATGGCAGGATATGAAATTTTATCTGAAGGAACAGGTGCTAACTCCGGCAGTTGTTTAATTAATCTTAAAGACTGGAGTGAAAGAAAACATTCACTTCAGGAAATTATGGATGAACTGGAAGAAAAGTCGAAAAATATTAAAGGTGCAAGTATTGAATTCTTTCCACCACCTGCATTGCCCGGCTATGGCGCAGCCGGTGGTTTTGAATTACGCCTGATGGATAAAGCTGGAAGCGGCGATTACAAAAAAATGGAAGCAGTAAGCAAAGACTTTGTGAAAGAATTGAGCAAACGTCCCGAAATAACTTCTGCGTTTACGTTTTATAGTGCCAGCTTTCCACAGTATATGCTGTCGATAGATAATGATAAAGCGCAACAAAAAGGCATTACTATTGAAAACGCGATGGATAATCTTTCAACGCTGATAGGCAGTAACTACGAAACAGGTTTTATTAAATACGACAGGCCGTATAAAGTAATGGTGCAGGCATTACCGCAATATCGTGCCCTGCCCGAAGATATCCTGAAGTTTTATGTAAAGAATGATAAAGGCGACATGGTACCTTATTCCGCATTTATGAAAATTGAAAAAACTTATGGCTTGTCTGAAATAACCAGGCATAATATGTACAACTCTTCTGAAGTAAGCGGCGGCCCTGCACCCGGCTACAGCAGCGGCGCAGCTATTGCGGCCGTGCAGGAAGTAGCTGAAAAAAAATTACCAAGAGGATTTGGTATTGAATGGTCTGGTATTTCGCTGGATGAAGTAAGAAGAGGAAACGAAGCCTTGTATATATTCATCATCTCACTGGCATTCGTATATCTTGTATTATCCGCACAATACGAAAGCTTTGTATTGCCTTTACCAATACTGCTCTCCTTACCTGTAGGTATTTTCGGAACATTCTTTTTATTAAAAGTAATGGGGCTTGAAAATAATATATACGCGCAGATAGCAATGGTAATGTTGATTGGTATTCTCGGTAAAAACGCGGTACTTATTGTGGAATTTGCCGTTCAACGACACCGTGCAGGAAGCTCTCCACTGCAAGCAGCTATTGATGGCGCTGGAGCAAGATTACGCCCGATCGTAATGACATCCTTTGCATTTATAGCAGGATTGATACCCTTAGTATTTGCCACAGGCCCTGGCGCATTGGGCAACAGAACTATTGGTACAGCCGCCGCAGGAGGTATGATATTCGGTACAATATTCGGGGTACTGATCATCCCGGGTATCTATTACATTTTTGCCAAAATATCGGAGAAACATATTATGGTAGAAGGTGAAGAAGAAAATCCTTTAACTGAAGACATAGATAACGCATAA
PROTEIN sequence
Length: 658
LFALVLAIGIVVDDAIVVVEAVHAKMEKENLNPLAATKAAMKEIGGAIIAITLVMAAVFVPVSFMSGPVGVFYRQFSVTMATSIILSGIVALTFTPALCAIILRNTHGKKKKNMLSRFLDSFNNGFNRLLGKYKNIVAKIANRRVVTFLALIAFCAGTWFISSSIPSGFIPNEDQGVFYAIILTPPGSTLERTNQVALDLQKIAGKMEDVKSVSSMAGYEILSEGTGANSGSCLINLKDWSERKHSLQEIMDELEEKSKNIKGASIEFFPPPALPGYGAAGGFELRLMDKAGSGDYKKMEAVSKDFVKELSKRPEITSAFTFYSASFPQYMLSIDNDKAQQKGITIENAMDNLSTLIGSNYETGFIKYDRPYKVMVQALPQYRALPEDILKFYVKNDKGDMVPYSAFMKIEKTYGLSEITRHNMYNSSEVSGGPAPGYSSGAAIAAVQEVAEKKLPRGFGIEWSGISLDEVRRGNEALYIFIISLAFVYLVLSAQYESFVLPLPILLSLPVGIFGTFFLLKVMGLENNIYAQIAMVMLIGILGKNAVLIVEFAVQRHRAGSSPLQAAIDGAGARLRPIVMTSFAFIAGLIPLVFATGPGALGNRTIGTAAAGGMIFGTIFGVLIIPGIYYIFAKISEKHIMVEGEEENPLTEDIDNA*