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SCN18_25_8_15_R2_B_scaffold_3970_1

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(3..1091)

Top 3 Functional Annotations

Value Algorithm Source
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.1
  • Coverage: 363.0
  • Bit_score: 646
  • Evalue 2.20e-182
Serine hydroxymethyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE22_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 85.1
  • Coverage: 363.0
  • Bit_score: 646
  • Evalue 1.60e-182
glycine hydroxymethyltransferase similarity KEGG
DB: KEGG
  • Identity: 85.1
  • Coverage: 363.0
  • Bit_score: 646
  • Evalue 4.50e-183

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1089
ATGGGCTCCGTACCTACCAATAAATACGCGGAAGGATATCCCGGCAAACGTTTTTACGGCGGGTGCGAAGTAATTGACGAGATTGAAACGCTTGCTATTGAGCGTTTAAAGAAAATATTTAATGCAAGCTGGGCTAATGTTCAGCCACATAGTGGCGCTCAGGCAAATACTGCCGTATTTTTAGCATGTTTAAAACCGGGCGATAAAATCCTCGGGCTTGATTTAAGCATGGGCGGTCATCTTACCCATGGAAGCCCTGCCAATTTCAGCGGTAAAAATTACCAGGCACTGTTTTACGGTGTAAAAAAAGAAACCGGCACGGTAGATTATGACCACCTGGAAGCAACCGCCAAAAAGGAAAAACCTAAAATGATCATCTGTGGTGCTTCTGCTTATAGCCGCGACTGGGACTATAAACGCATCAGGGAAGTTGCTGACAGCATCGGCGCTTTGGTATTAGCTGATATTGCTCACCCGGCGGGTTTAATTGCAAAAGGATTGCTGAACGATCCTTTTGAATATTGCCATATTGTAAGTTCAACTACACATAAAACATTGCGGGGTCCACGTGGCGGCATTATAATGATGCGTAATGATTTTGATAATCCTTTCGGCGTAAAAGATCCCAAAGGTAATATCCGGCCCATGAGTGCTTTGCTTGACCTTGCTGTATTTCCCGGAATGCAGGGTGGTCCGCTTGAGCATGTTATTGCTGCCAAAGCTGTGGCATTTGGTGAAATACTAACGGATGATTATACACGCTATGCACAGCAGATCATTCAAAACGCGCAGGCAATAGCCAAAGCTTTTGTAAGTAAAGGATATGATCTTATCAGTGGTGGTACAGATAACCACCTGATGCTGATAGATCTTCGCAATAAAAATCTTACCGGTAAAAAAGCGCAGGAAACATTAGACAAAGCGCATATTACATTAAATAAAAACGCGGTGCCTTTTGATGATAAAAGCCCATTCATTACCTCAGGTATAAGAGTTGGCGTACCGGCTATTACTACACGCGGGCTGAAGCAGGAACACATGCAAACCATTGTTGACATGATTGATACAGTATTAACCAATGCCGGCGAT
PROTEIN sequence
Length: 363
MGSVPTNKYAEGYPGKRFYGGCEVIDEIETLAIERLKKIFNASWANVQPHSGAQANTAVFLACLKPGDKILGLDLSMGGHLTHGSPANFSGKNYQALFYGVKKETGTVDYDHLEATAKKEKPKMIICGASAYSRDWDYKRIREVADSIGALVLADIAHPAGLIAKGLLNDPFEYCHIVSSTTHKTLRGPRGGIIMMRNDFDNPFGVKDPKGNIRPMSALLDLAVFPGMQGGPLEHVIAAKAVAFGEILTDDYTRYAQQIIQNAQAIAKAFVSKGYDLISGGTDNHLMLIDLRNKNLTGKKAQETLDKAHITLNKNAVPFDDKSPFITSGIRVGVPAITTRGLKQEHMQTIVDMIDTVLTNAGD