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SCN18_25_8_15_R2_B_scaffold_6016_5

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: 3317..4825

Top 3 Functional Annotations

Value Algorithm Source
GH3 auxin-responsive promoter n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8V0_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 500.0
  • Bit_score: 826
  • Evalue 1.20e-236
GH3 auxin-responsive promoter similarity KEGG
DB: KEGG
  • Identity: 77.0
  • Coverage: 500.0
  • Bit_score: 826
  • Evalue 3.40e-237
GH3 auxin-responsive promoter {ECO:0000313|EMBL:AEW02307.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.0
  • Coverage: 500.0
  • Bit_score: 826
  • Evalue 1.70e-236

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1509
ATGGGCATATTAAGTACAACAATATCACAACTTGCACGCATGCGCTTATGGCGCATTGAAGCGTGGATAGAAAATCCTGTAGCCTCTCAGAGAGAAGTGTTGCAGGACCTGGTTACTTCAGCGCAATACACAGAATTTGGCAGAAAATATAATTTCTCTTCATTATTCTCTACCCGCGATTTTAAAAAAGAAATCCCGATTCATGAATATGACGACCTGAAGCCTTATATACAAAGGATGATGAACGGTGAAGAGAATATTTTATGGAATACCCCTATACAGTGGTATGCAAAAAGCAGTGGTACAACCAGTGATAAAAGTAAGTTTATACCTGTAAGTAAGGAGAGCCTTGAAGAGTGCCATTACAAAGGTGCAAAGGATACCCTTACGATGTATTACAATTTTAACCCCGATTCGGAATTACTAACCGGTAAAGGGCTTGTAATAGGCGGAAGTCATACCATTAACCAGATTAATGACGATGTGCACTTTGGCGATTTAAGTGCTGTATTGCTGCAGAATTCCCCTGTATGGGGGCAGTGGATAAGAACGCCGGAACTGTCAATAGCGCTTATGGATGAGTGGGAGTCTAAAATAGAAAGGCTGGCAGAAAGCACCATCAGGGAAAATGTGACTTCTATATCCGGCGTACCTACCTGGACGTTGGTGTTGTTTAAAAGAATTCTTGAGATAACAGGTAAAAAAAACATGGCTGAGGTTTGGCCGTCGCTGGAATTATATATTCATGGCGGCGTTTCGTTTACCCCTTATCGGGAGCAATTCCGAAAGCTGATTGGTAAAAACATTTATTATATAGATTCTTATAATGCCAGTGAAGGTTTTTTTGCGGCACAGGATAATCCGGGAGCTGAGGGCATGCTGCTCTTCGTTGATCATGGCATATTCATGGAGTTTATGCCTTTTGAAGAATATGGCAAGAAAGATCCGCAGACCATTGGATTAAAAGATGTGGAGATAGGCAAAAATTATGCTCCTGTAATCAGTACCAATGGCGGGCTTTGGCGTTACCTGCTTGGTGATACCATCCAGTTTACCAGCCTGCGCCCATTTCGTATAAAGGTGAGCGGAAGGTTAAAGCATTTTATTAACGCGTTTGGAGAAGAAGTGATTGTGGATAATACCGACAAAGCTGTTTCAATAGCCTGTAAAACAACCGGCGCAATTGTGAATGACTATACCGCTGCTCCTGTATATTTCGGAGAAGAATCAAACGGCGCGCATGAATGGTTGATTGAATTTGAGAAACGACCTGATGATGTTAATGTATTCTCAGCCGAACTGGATAAAGCATTACAATCTATTAACAGCGATTATGAAGCAAAACGTCATAAAAATATCGCGTTAAGACAAACGATAGTTCATATGATGGACAAAGGGTTTTTTAATGACTGGTTAAAAAGCAAAGGAAAACTCGGCGGGCAGCATAAGGTGCCCAGGTTAAGCAATGAGCGTAATTTTATAGAGGAAATGCTTCAATTCAAACCATGA
PROTEIN sequence
Length: 503
MGILSTTISQLARMRLWRIEAWIENPVASQREVLQDLVTSAQYTEFGRKYNFSSLFSTRDFKKEIPIHEYDDLKPYIQRMMNGEENILWNTPIQWYAKSSGTTSDKSKFIPVSKESLEECHYKGAKDTLTMYYNFNPDSELLTGKGLVIGGSHTINQINDDVHFGDLSAVLLQNSPVWGQWIRTPELSIALMDEWESKIERLAESTIRENVTSISGVPTWTLVLFKRILEITGKKNMAEVWPSLELYIHGGVSFTPYREQFRKLIGKNIYYIDSYNASEGFFAAQDNPGAEGMLLFVDHGIFMEFMPFEEYGKKDPQTIGLKDVEIGKNYAPVISTNGGLWRYLLGDTIQFTSLRPFRIKVSGRLKHFINAFGEEVIVDNTDKAVSIACKTTGAIVNDYTAAPVYFGEESNGAHEWLIEFEKRPDDVNVFSAELDKALQSINSDYEAKRHKNIALRQTIVHMMDKGFFNDWLKSKGKLGGQHKVPRLSNERNFIEEMLQFKP*