ggKbase home page

SCN18_25_8_15_R2_B_scaffold_5042_2

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: 550..3015

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GGT6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 65.0
  • Coverage: 806.0
  • Bit_score: 1095
  • Evalue 0.0
TonB-dependent receptor {ECO:0000313|EMBL:CCH53111.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 806.0
  • Bit_score: 1095
  • Evalue 0.0
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 64.0
  • Coverage: 810.0
  • Bit_score: 1082
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2466
ATGAGATATTTACTAACGATGCCTGATCATATTGCTGTATTTAAAAGAGCTATACAATATGCCTTTACCATTATTATTGTAACTGTTTGCTTTTTACAAACCTCAGCTCAAACAAAACCCGCATTTGCCATTTCCGGTAAAGTAATTGAAGCTGCACACAATACCGCGCTGGGTTTTGCAACGGTAAGCCTGTTCAAACAGGGAGACAGCATAGCAATAACTGCTGTTAATACCGCGGAAAACGGTGAGTTTTCTGTCAATGCCTCCACAGGCAGGTATTTTATAGAAATAGATTTTATTGGTTACGACTCCTACAGATCACCGCTTATACATTTATCTGCCGATCATGCAAACCATAAGCTGGGCACTATAAAATTAACCGCTTTAACAAAAACACTTGACGAAGTATTGGTGCGTGCTGAAAAAAGCAGCATGCAGCTTTCGCTCGATAAAAAAGTATTTAATGTTGGTAAAGACCTTGCCAATAGCGGTGGAACAGCAGCCGATATACTCAGTAATGTACCTTCTGTTGCGGTTGATGTAGATGGTAATGTAAGCTTAAGAGGAAGCAGCAGTGTAAGGATTTTGATTGATGGAAAACCTTCAGGGCTTGTAAGTATAAAAGGCGGCAGTGGTTTGCAGCAACTGCAGGGGAGTATGGTTGATCGCATTGAGATTATTACAAATCCTTCAGCAAGGTACGAGGCGGAAGGTATGGGTGGTATCATCAATATTATTTTGAAAAAAGAAAAAAGAGATGGGTTTAACGGCTCGTTTGATGTAATTGCAGGTTATCCTGAAAACTTTGGACTGGCAGCCAATGTTAACTATCGCCGCCGCAATCTCAATTTCTTTGTGAACTATACCGCTTCCTATCGTAACGCTCCGGGGAAAAATGATCAATACCAGGAGTTTTACCGGAACGACAGCGTGTTCATTAGTACAAAAAATATGGAGCATCACCTCAAAGGATTATATAATACTGCCCGCGCCGGGCTTGACTATTATTTTGATGATAAAAACATTTTAACCGCAGCGTATACTTACCGCATCAGTAAGGGTAAAAGATTTTCTGATATTTATTATCATGATTATCTCGGAACAATAAAAGATCCCACGGCTATCACATACCGCACACAGGATGAAACAGAAACAGAACCTAACTCCGAATACTCGTTAAATTTTAAACGTATTTTCAAAAGAGAGGGACATGAATTGACTGCCGATATCCGTTATCTTGATAACTGGGAAAATTCTGACCAGTATTTCGGACAGCATGTATATAAACCTGATGGAACATCTTCTGGTATTCCATACCTGCTGCAACGTGCGTTGAATGACGAAACTGAAAAACAGTACCTCGCTCAGATAGATTACATACAACCCTTTGGCGAAAAAGGAAAATTTGAAACCGGTATACGTACCAGCTTCAGGGATATGACCAACAACTATACGGTAACCCAGCGTGAAGCAGATAATAGCTGGTTCGAAGTGCCGGGGCTCACCAACAATTTTGTGTATAATGAAAATATTCATGCACTATACGCCATTGTAAGCAATAAAGTTAAAAAGTTCTCTTATCAGCTTGGCGTTCGTGGGGAGCTGACAAACGTAACTACTACATTAAAGCAAACCAACCAGGTTAACCCGAGAAAGTATGCGAATTTTTTTCCCAGCGTACATCTTACTTATGATTTGCCAAACGGGCATGCGGTGCAGTTAAGCTATAGCAGAAGGATCAGGCGCCCGCAGTATAATGATCTTAGCCCTTTTATGACGTACAGCGATAACCGAAATTATTTCAGCGGTAATCCAGACCTTAATCCTGAGTTCACACATTCCTTTGAAATAGGGCATATCAAGTATCTCAGTAAATTTTCTGTCAGCTCATCATTGTATTACCGGAATACAAAGGGTAAAATAATGACTGTGCGCCGCGTGGATGAAAATGGCAATACCGTTTCATTGCCGGAAAACCTTGCAACAGAAAATTCGTTTGGCGCAGAATTTACCGGCTCATATTCACCGTGGAACTGGTGGAAGGTTGACGGTAGCTTTAATTTCTTCCGCGCAATAACAGACGGAAGCAATCTTGATGATGAATTTAAAAGTGATACTTATAGCTGGCTGTTCCGGCTGCTGTCCAGAACAACGGTTTGGAAGAATACAGATATTCAGTTGCGCGGTAATTATGAAGCTCCGCAGCAAACACCGCAGGGTAAACGTAAATCACTTGCCACTTTGGATTTCGCTGTAAGCAAGGATATTATGAAGAACAAGGCAACACTAACATTAAATATTGTAGATGTATTTAACTCACGCAAATACCGTTCTGTAATTGAAGGCTCTAATTTTTATATAATTACCAATTCACAAGGGCGGATGCGCCAGGCAAATCTTACGTTCAACTACAGGCTTCGCCAGGCAAAGAAAAAGGTTAAGGAAACATTACAGGGCGAATCATAA
PROTEIN sequence
Length: 822
MRYLLTMPDHIAVFKRAIQYAFTIIIVTVCFLQTSAQTKPAFAISGKVIEAAHNTALGFATVSLFKQGDSIAITAVNTAENGEFSVNASTGRYFIEIDFIGYDSYRSPLIHLSADHANHKLGTIKLTALTKTLDEVLVRAEKSSMQLSLDKKVFNVGKDLANSGGTAADILSNVPSVAVDVDGNVSLRGSSSVRILIDGKPSGLVSIKGGSGLQQLQGSMVDRIEIITNPSARYEAEGMGGIINIILKKEKRDGFNGSFDVIAGYPENFGLAANVNYRRRNLNFFVNYTASYRNAPGKNDQYQEFYRNDSVFISTKNMEHHLKGLYNTARAGLDYYFDDKNILTAAYTYRISKGKRFSDIYYHDYLGTIKDPTAITYRTQDETETEPNSEYSLNFKRIFKREGHELTADIRYLDNWENSDQYFGQHVYKPDGTSSGIPYLLQRALNDETEKQYLAQIDYIQPFGEKGKFETGIRTSFRDMTNNYTVTQREADNSWFEVPGLTNNFVYNENIHALYAIVSNKVKKFSYQLGVRGELTNVTTTLKQTNQVNPRKYANFFPSVHLTYDLPNGHAVQLSYSRRIRRPQYNDLSPFMTYSDNRNYFSGNPDLNPEFTHSFEIGHIKYLSKFSVSSSLYYRNTKGKIMTVRRVDENGNTVSLPENLATENSFGAEFTGSYSPWNWWKVDGSFNFFRAITDGSNLDDEFKSDTYSWLFRLLSRTTVWKNTDIQLRGNYEAPQQTPQGKRKSLATLDFAVSKDIMKNKATLTLNIVDVFNSRKYRSVIEGSNFYIITNSQGRMRQANLTFNYRLRQAKKKVKETLQGES*