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SCN18_25_8_15_R2_B_scaffold_4633_9

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(5943..6449)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAU3_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 40.5
  • Coverage: 163.0
  • Bit_score: 137
  • Evalue 6.50e-30
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 163.0
  • Bit_score: 137
  • Evalue 1.90e-30
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AEW00286.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.5
  • Coverage: 163.0
  • Bit_score: 137
  • Evalue 9.20e-30

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 507
ATGATGGAGCATGAAAGTTTAGTTGAATTATACCGGGAAGTCTTTCCCGAAGCAGCGCGTTTAATAAAGCGTTTAGGTGGAAACCTGGAAGAAGCGAAAGATGCCTTTCATGATGCACTATTGATATATCTTGAAAGAGAAGCAAAAGGTACATTGCAAATTCATACTTCAGCAAAAGCATATTTGCTGGGCACTGCCAAAATACTTTGGCTTCATGCTAAAGATCAATATTTCGATCCGTTGCCGGAAGATGTTGAAGCATTTGTTGATGAAGAAAATGAAGCTGCTGATGAACATAAAAATGTTTTTCACTACTTATTGTTGGCAGGACAAAAATGTTTGCACATGCTTAAAGCATTTTATTACGATAATCTTTCGCTTCAACAAATCGCTGCAGGTTTTGGTTTCAACGGAGTTCGTTCGGCAACAGTACAAAAACATAAATGCATTGAAAAAATTCGTACAGCGCTAAAAAAAAGAAATGTATATGAGGAACGATTTAATTGA
PROTEIN sequence
Length: 169
MMEHESLVELYREVFPEAARLIKRLGGNLEEAKDAFHDALLIYLEREAKGTLQIHTSAKAYLLGTAKILWLHAKDQYFDPLPEDVEAFVDEENEAADEHKNVFHYLLLAGQKCLHMLKAFYYDNLSLQQIAAGFGFNGVRSATVQKHKCIEKIRTALKKRNVYEERFN*