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SCN18_25_8_15_R2_B_scaffold_4698_3

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(3673..4980)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 435.0
  • Bit_score: 723
  • Evalue 1.00e-205
ribosomal protein S12 methylthiotransferase n=1 Tax=Segetibacter koreensis RepID=UPI000382110D similarity UNIREF
DB: UNIREF100
  • Identity: 80.9
  • Coverage: 435.0
  • Bit_score: 735
  • Evalue 2.40e-209
30S ribosomal protein S12 similarity KEGG
DB: KEGG
  • Identity: 79.5
  • Coverage: 435.0
  • Bit_score: 723
  • Evalue 3.50e-206

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1308
ATGAAAACAAGAACGCTCAGGAAAGATAAGGTTAATATTATTACACTTGGATGCAGCAAGAATGTTGTTGATAGTGAAGTGCTCAGCGGTCAGCTTAAAGCAAATGATATAGCCGTGGTGCATGAAAGCAAAAAGCCCGATCATAACATAGTTGTAATTAACACCTGTGGCTTTATTGATAAAGCTAAAGAAGAGTCAATAAATACAATCCTGGATCATGTAGAATTGAAGAAGAAAGGAAGGATTGATAAAGTATATGTTACCGGTTGCCTGAGCGAAAGATACCGGCAAAACCTGGAAGAAGAAATTCCGGAAGTAGACGCCTGGTTTGGTACCCTGGAGCTCCCTTTAATGCTGAAACAATTTAATGCGGATTATAAAACAGAGCTGCTTGGAGAAAGATTATTAAGCACTCCAAAGCATTATGCTTACATGAAAATATCTGAGGGGTGTAACCGCACCTGTTCTTTCTGCGCTATTCCTTTAATGCGGGGGCAGCATGTAAGCAAACCAATTGAGCAACTGGTTGCCGAAGCGGAAGGATTAGTGAAAAATGGCGTAAAAGAAATAATGCTGATAGCGCAGGAGCTTACTTATTACGGACTGGATATTTATAAAAAAAGGGATTTACCCCGCTTACTGCATGCATTAGCTGATGTAAAAGGATTGGAATGGATACGGCTACATTATGCATATCCTTCAAAATTTCCTTTGGAGATCATTGATGTGATGAAAGATCGCCCGAATATCTGCAATTACCTTGATATGCCTTTGCAGCATGCCAGCGATAATATGCTGAAGGCTATGCGCAGGCAGATCACAAAATCAGAAATGGATGACCTGATAGGGGAAATAAGGAGCCGTATTCCCGGAATTTGTTTGCGTACCACATTAATTACAGGTTTCCCCGGTGAAACAGAAAAAGATGTTGAAGATGTGAAATCATTTTTGCAACAGCACCGGTTTGACAGGGTTGGCATATTTACTTATTCGCATGAAGAAGGAACTTCAGCACATGCTTTAGCTGATAATGTTCCCAATGAAGAAAAGGAGAGAAGAGCGCAGGAAATTATGGAAGTGCAGCAGGAGATCAGTTATGAAAAAAACCAGGATAAGATAGGGCAGGAGTTCAGGGTAATTATTGATAAAAAAGAGGCAGGTCGTTATTTAGCCCGTACAGAATTTGATTCTGTGGAGGTAGATAATGAAGTGATCATTAATGCGGATAAAAAACTACCTGTCGGCGAATTTGTAAACGTGCGTATTACAAAAGCTTATGATTACGATTTAGAAGGAGAGTTAATATAG
PROTEIN sequence
Length: 436
MKTRTLRKDKVNIITLGCSKNVVDSEVLSGQLKANDIAVVHESKKPDHNIVVINTCGFIDKAKEESINTILDHVELKKKGRIDKVYVTGCLSERYRQNLEEEIPEVDAWFGTLELPLMLKQFNADYKTELLGERLLSTPKHYAYMKISEGCNRTCSFCAIPLMRGQHVSKPIEQLVAEAEGLVKNGVKEIMLIAQELTYYGLDIYKKRDLPRLLHALADVKGLEWIRLHYAYPSKFPLEIIDVMKDRPNICNYLDMPLQHASDNMLKAMRRQITKSEMDDLIGEIRSRIPGICLRTTLITGFPGETEKDVEDVKSFLQQHRFDRVGIFTYSHEEGTSAHALADNVPNEEKERRAQEIMEVQQEISYEKNQDKIGQEFRVIIDKKEAGRYLARTEFDSVEVDNEVIINADKKLPVGEFVNVRITKAYDYDLEGELI*