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SCN18_25_8_15_R2_B_scaffold_7132_2

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(164..541)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAW8_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 49.1
  • Coverage: 106.0
  • Bit_score: 117
  • Evalue 8.90e-24
Chemotaxis protein CheY {ECO:0000313|EMBL:ETZ19683.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.2
  • Coverage: 120.0
  • Bit_score: 121
  • Evalue 6.60e-25
LytTR family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 106.0
  • Bit_score: 117
  • Evalue 2.50e-24

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 378
ATGCAAGACGAATCCCTGGTTCTCAATAGCCCGAATCAAACTTTATCACAAACAAAGCATGACTTTGTATTTGTAAAATCTGAGTATAAGATCATCAAAATAATACTTGATGATATTATGTTTTGTGAAGGAATGAAGGATTACACACAGATCTATGTAAATGGCCGCATGCAGCCGGTGCTTACACTGCAAAATCTAAAAAACTTCAGCAGCCGTTTGCCTGAAAGCCAGTTTGTACGTGTGCATCGTTCTTTTGTGATTTCCCTGCAACATATTGAAACTATTTCGCGCAACGAGATAAGTATAGGAAAAAAAATCGTTCCGATAGGTAATAGTTACCGGAACGATTTCTTCAATATTATAGAACAATATTCCTGA
PROTEIN sequence
Length: 126
MQDESLVLNSPNQTLSQTKHDFVFVKSEYKIIKIILDDIMFCEGMKDYTQIYVNGRMQPVLTLQNLKNFSSRLPESQFVRVHRSFVISLQHIETISRNEISIGKKIVPIGNSYRNDFFNIIEQYS*