ggKbase home page

SCN18_25_8_15_R2_B_scaffold_6331_2

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(1097..3901)

Top 3 Functional Annotations

Value Algorithm Source
Alpha-L-rhamnosidase-like protein Glycoside hydrolase family 78 n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FCI1_FLAJ1 similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 887.0
  • Bit_score: 988
  • Evalue 2.60e-285
Putative glycosidase {ECO:0000313|EMBL:GAO43098.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.6
  • Coverage: 929.0
  • Bit_score: 1192
  • Evalue 0.0
alpha-L-rhamnosidase similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 887.0
  • Bit_score: 988
  • Evalue 7.30e-286

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2805
ATGAATTGCCGTATGAAAAAAGTATTCGCTTTATTTAAAACAGCGTTCTTCGCTGTATCCTTCTCATTTATATTACAGCAATGCGTACCGGGTAAAGGCAGCAGCCTGCAGGTAAATACACTTACCGTAGAAGGCAGGGACACACTTCTGGGCTCAGATATACTGCAACCACGGTTCAGCTGGAAAATCGAATCCGGCAAACAAGATGTAAAACAAATAGCTTACCAGGTTTGGGTATCAGGCAATAGCGATGCATTAAGCAAAAATGAAGGAGAGATATGGAATAGCGGCAAGATAGCGTCAGATTCTTCTCTGAATATAGTATACAAAGGCAAACCATTGCAAGCCTTTCAATCATATTACTGGAAAGTAAAAATCTGGGACAATCATGGAGAGGAAGCTGAAAGTGAAACAGCTTACTGGAGCATAGGTATGTTGCAACCTTCAGACTGGCAGGCTAAATGGATTGGGCTAAATGCGTTTAATAAAAATGACCAGCCTGATAGTACCTTAACAAGACTCGCGGCAAGATACCTGCGTAAAGAATTTTCTGCAGATAAAAAAATTACAGCAGCTACTGCTTATATCAGCGGCATGGGTTTATATGAGCTCTATCTTAACGGAGAAAAAGTGGGTATTGATGTTTTATCTCCAACCGTATCTGAGTACAATAAAAAAATATTTTATAACACCTACAACATCACCAAACAGTTGCAGCAAGGCGTCAATGCAATGGGGGTGATATTGGGTAATGGCCGTTTTTTTGCCGTTCGCAACTATCATGGTAAACCGAACCCCTTAACACAAATAGCACAGGCACAGTATGGATTGCCACAGGTTTTGTTACAACTGCGCATTCAATATGCAGATGGTTCTGTTGCCTGGATTAATTCGGATGAAAGCTGGAAAGTAACAGACAACGGCCCTATACTCGCAAACAACGAATTTGACGGGGAAGAATATGATGCTACTAAAGAATTGACGGGATGGAATAAAACAGGTTATAATGACCAGGAATGGAAAGTTGCAGACCTGATGTCGCCGGGAAACGTGCGTATAGAAGCGCAGCCCAATGAGAATATCCGCGTTAAAGAAACATTGAGCCCCATATCTATGCATGAAACAACGCGTGGTTCTTACATTCTTGATATGGGCCAAAATATGGTGGGCTGGTTGGCCATAAAAGTAAAAGGAGCAAAAGGCGATACCATCTGCATGCGTTTTGCCGAAACAATGAAAGGAAAAGATGCTTTATACCTGGCGAATATGCGTGATGCCCGGGTAACGGATAAATATATACTCAAAGGCGATGGCATAGAATATTGGGAGCCCCGCTTTACTTATCACGGTTTCCGTTTTGTTGAAGTAGAGGGTTTGAAAAACAAACCCGGCATAAAAGATTTTACCGGTAAAGTAGTATATGATAATGTGGCTACTACCGGAACTTTTGAAACATCTAATAAAACTATAAACGCTGTATTTAAAAATGCATACTGGACCATACGGGGCAACTACCGGGGTATGCCTACCGATTGCCCGCAAAGAGATGAGCGGATAGGATGGTTAGGCGACAGGGTGATGAGCTCTTATGGTGAAAGCTTTTTATTCGACAATTCCCGTTTATATGCCAAATGGCTTGATGATATCAAAGATGCACAAAAGGAAAACGGAAGCATTCCTGACATTGCGCCAAGTTTTTGGGATCGCTATGCAGACAATGTTACCTATCCCAGCGCTTTCATCCTGATTCCCGGAATGCTGCGCAAACAATTTGGAGATAACCGCAGCCTGGAGAAACAGTATCCTGCCATGAAAAAATGGGTGTTGTATATGTGGAATACATACAGGGAAGGCGATCTTGTACTAAAAGATAATTATGGTGATTGGTGCGTACCGCCTGAATCGCTGGACATGATATGGTCGCAGGATCCTAACCGTGTTACCAATGGCGGTCTGCTGGCTGCTGCTTACTATTATTACTGTTTGGGATTGATGAAACAATATGCTATACAATTGAAGCAAACCGAAGATGCAAATAATTTTAACGCGATAGCACAAAAGGTATTGACCGCTTTCAATAAGAAATTCTATAACGCTGCTACAAAATCTTATGCTAATAATACGGTAACGGCTAACCTGCTCCCGCTTAGTTTCGGTATGGTGCCGGCAGAAGATAAGGCTACCGTGTTCAACAATATCCGTAACCGCCTCAAAGAATTTAACGATCACGTAAACTCCGGCATCATTGGCGGTATGTGGTTAATGCGGGGATTAACAGACAATGGCGCGCCTGATTTAGCCTATAAGCTGGCTACCAATACTACCTACCCAAGCTGGGGCTATATGGTTGAGCAGGGGGCAACTACCATCTGGGAATTATGGAATGGTGATGCGGCCAACCCGGTGATGAACTCAGGCAATCACCAGATGTTGCTAGGAGATCTGTTGGTGTGGTATTATGAATACCTGGCAGGCATAAAAACAGATACGGAAGAGGTAGCTTTTAAAAAAATTATCATGAATCCCATTTTCCCCGAAGGACTGGATTTTGTAAAAGCATCATTAGATACAAAATATGGAATAGTAAAAAGCGAATGGAAAAAGACTGTAACAGGCCTGGAGTGGAATATTACGATACCGGCAAATACATCAGCAGCAATTATGTTACCCGGCAATAAGAATGCGATAACAGAAGGAGGAAAATCATTGACACAACACCAGCTAAGAAATGCAGATAAAGTCGATGACAATAAAACTTTGGTTACAGTAGGATCAGGCACCTACCAATTTTTAATAAAAAAATAA
PROTEIN sequence
Length: 935
MNCRMKKVFALFKTAFFAVSFSFILQQCVPGKGSSLQVNTLTVEGRDTLLGSDILQPRFSWKIESGKQDVKQIAYQVWVSGNSDALSKNEGEIWNSGKIASDSSLNIVYKGKPLQAFQSYYWKVKIWDNHGEEAESETAYWSIGMLQPSDWQAKWIGLNAFNKNDQPDSTLTRLAARYLRKEFSADKKITAATAYISGMGLYELYLNGEKVGIDVLSPTVSEYNKKIFYNTYNITKQLQQGVNAMGVILGNGRFFAVRNYHGKPNPLTQIAQAQYGLPQVLLQLRIQYADGSVAWINSDESWKVTDNGPILANNEFDGEEYDATKELTGWNKTGYNDQEWKVADLMSPGNVRIEAQPNENIRVKETLSPISMHETTRGSYILDMGQNMVGWLAIKVKGAKGDTICMRFAETMKGKDALYLANMRDARVTDKYILKGDGIEYWEPRFTYHGFRFVEVEGLKNKPGIKDFTGKVVYDNVATTGTFETSNKTINAVFKNAYWTIRGNYRGMPTDCPQRDERIGWLGDRVMSSYGESFLFDNSRLYAKWLDDIKDAQKENGSIPDIAPSFWDRYADNVTYPSAFILIPGMLRKQFGDNRSLEKQYPAMKKWVLYMWNTYREGDLVLKDNYGDWCVPPESLDMIWSQDPNRVTNGGLLAAAYYYYCLGLMKQYAIQLKQTEDANNFNAIAQKVLTAFNKKFYNAATKSYANNTVTANLLPLSFGMVPAEDKATVFNNIRNRLKEFNDHVNSGIIGGMWLMRGLTDNGAPDLAYKLATNTTYPSWGYMVEQGATTIWELWNGDAANPVMNSGNHQMLLGDLLVWYYEYLAGIKTDTEEVAFKKIIMNPIFPEGLDFVKASLDTKYGIVKSEWKKTVTGLEWNITIPANTSAAIMLPGNKNAITEGGKSLTQHQLRNADKVDDNKTLVTVGSGTYQFLIKK*