ggKbase home page

SCN18_25_8_15_R2_B_scaffold_14894_1

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: 1..228

Top 3 Functional Annotations

Value Algorithm Source
10 kDa chaperonin n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PI90_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 75.0
  • Bit_score: 137
  • Evalue 2.90e-30
chaperonin Cpn10 similarity KEGG
DB: KEGG
  • Identity: 90.7
  • Coverage: 75.0
  • Bit_score: 137
  • Evalue 8.30e-31
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 75.0
  • Bit_score: 137
  • Evalue 4.10e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 228
GCTCCTGCGGAAGAAAAGACTGCAGGGGGCATCATTATTCCTGATACTGCAAAAGAAAAGCCACAGCGTGGAACTGTTGTTGCCGCTGGTCCTGGTAAAAAAGACGAGCCTGTAAGCGTAAAATCAGGTGATGTAGTATTGTATGGCAAATATGCCGGTACTGAAATAACGATTGATGGCGGAGACTATCTTATTATGAGAGAGTCTGATATTCTTGCTATCGTTTAA
PROTEIN sequence
Length: 76
APAEEKTAGGIIIPDTAKEKPQRGTVVAAGPGKKDEPVSVKSGDVVLYGKYAGTEITIDGGDYLIMRESDILAIV*