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SCN18_25_8_15_R2_B_scaffold_13325_1

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(14..616)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W217_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 44.0
  • Coverage: 200.0
  • Bit_score: 175
  • Evalue 4.40e-41
Putative TetR family transcriptional regulator {ECO:0000313|EMBL:GAO43327.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.1
  • Coverage: 203.0
  • Bit_score: 221
  • Evalue 7.50e-55
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.5
  • Coverage: 200.0
  • Bit_score: 183
  • Evalue 6.00e-44

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 603
ATGGCAATTAAAGACAGCATTACGGAACAGCAGATAAAAGAAGCAGCGAAAAAGCTCTTCTTTAAGGAAGGCAGGTTTAAAGCCACCACACAGGAGATTGCGGATGCCGCCGGTGTAAACAGAACATTGGTGAATTATTATTTCCGCTCAAGAGATGTGTTGTTTGATGAAGTGCTCAAGGATGCAAAAGCAGCAATGACCAATCGCCTGAAAAGTTCTGTAGGAGAAGAAAATATTCCTTTCCGGGTGAGGATTGAAAGATTTGTTGATGTTATGATTGAAAATTCTTTTGCTTATCCCTATATAGATGTATACCTGGTCTCTCGCATGAATGATGATGTAAATCACCAGAATGATGTATTGGCAGACATAAAGAAGAATGAGGAATTGAAGCATTTTTTAAAATTGATTGAGGATGAGATGAGTAAGGGAACTATTGAAAAAATGCCCCCGGTGCAGTTCCTGATCAATCTTTTATCATTGCTTACTTACCCGGTTATAGTACAGCCCTTGTTTAAAAAAGTACTGCATTTCAGCGACAGGCAGTATCAGCAAATGCTGAAAGATCGCAAAGAGATCATTTTAAATTTGCTGTTGAAATAA
PROTEIN sequence
Length: 201
MAIKDSITEQQIKEAAKKLFFKEGRFKATTQEIADAAGVNRTLVNYYFRSRDVLFDEVLKDAKAAMTNRLKSSVGEENIPFRVRIERFVDVMIENSFAYPYIDVYLVSRMNDDVNHQNDVLADIKKNEELKHFLKLIEDEMSKGTIEKMPPVQFLINLLSLLTYPVIVQPLFKKVLHFSDRQYQQMLKDRKEIILNLLLK*