ggKbase home page

SCN18_25_8_15_R2_B_scaffold_23816_2

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(544..813)

Top 3 Functional Annotations

Value Algorithm Source
nucleotide sugar dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 58.2
  • Coverage: 91.0
  • Bit_score: 114
  • Evalue 1.20e-23
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:AHJ95673.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 91.0
  • Bit_score: 114
  • Evalue 5.80e-23
Nucleotide sugar dehydrogenase id=3692190 bin=GWF2_Bacteroidetes_33_16 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 55.1
  • Coverage: 89.0
  • Bit_score: 109
  • Evalue 1.00e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 270
ATGGTTAGAGAGTTGAGGGCTTATTCGCTTAATGTAGATATAGTTGATCCGTATGCTGATAGTGAAGAGCTTCAGCATGAGTATGGATTTGCATTATCTCCTGCAACAGGAAAAAATTACGATGCCGTAATTCTCGCTGTTCCTCATACTGAATATAAGAACCTTACCGAAGATTATTTACTTTCTATTACCAATCCTAGTGCTATTTTTGCTGACTTGAAAGGCTTGTATCGCGGCAGATTCTCAAAATTGAAATACTGGAGTTTGTAA
PROTEIN sequence
Length: 90
MVRELRAYSLNVDIVDPYADSEELQHEYGFALSPATGKNYDAVILAVPHTEYKNLTEDYLLSITNPSAIFADLKGLYRGRFSKLKYWSL*