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SCN18_25_8_15_R2_B_scaffold_24386_3

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(1100..1804)

Top 3 Functional Annotations

Value Algorithm Source
Anti-FecI sigma factor, FecR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8P3_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 40.4
  • Coverage: 213.0
  • Bit_score: 122
  • Evalue 3.00e-25
Uncharacterized protein {ECO:0000313|EMBL:KEQ28115.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.5
  • Coverage: 242.0
  • Bit_score: 133
  • Evalue 2.40e-28
anti-FecI sigma factor FecR similarity KEGG
DB: KEGG
  • Identity: 40.4
  • Coverage: 213.0
  • Bit_score: 122
  • Evalue 8.60e-26

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 705
ATGCCAAAATTCCGTTTGGAATATTTATTTACACTCTATCTGCAGAAAAAAATCAGTCCTGACGAAAACAGGGAACTGATGCAACTCATTGCTGACTCAGACAATGAAGACCAGATAATGAATATTATTGAAGATTTTACAGAATACCCTTCCCATGATAATGTATTAAGCCAGGAATTATCTGATAAAGTATTGAACAACGTTTTACCCAACAGAAATAAAGAGGAAGTTAAAGTAAAACATAAAAAAAGATCTCTGTTCCGGATGCAGGTTGCGGCAGCATGGCTTATCGTTATTAGTTTATTGGGGATATGGTTTAAAATAACCCACGATAAAAAAAATGTAACTGCACCACTCAGTACCCATCAGGCTGTGCAAATACACCCTGGTGGTAATAAAGCATTCTTAACCCTTGACGACGGTACTGTAATTAATCTCAACGAAATGGAACATGAAGCAGCACCTTCTGATAGTAATATTACAGTTGAAAAAAATGATGGGATTTTAATTTATAAAAACACCACCGGCAAAAGAAGCAATGCAAAATATAACAAGCTTACTACTCCAAGAGGAGGGCAATTCCAGGTATTGCTGCCCGATGGCACAAAAGTTTGGCTGAATGCGGCATCTTCTATCCGTTATCCTCTTTACAGAAATTATACAAAAAAAATAAAACAGGCCGGGTTCCTTTTAAAATTAATGTAA
PROTEIN sequence
Length: 235
MPKFRLEYLFTLYLQKKISPDENRELMQLIADSDNEDQIMNIIEDFTEYPSHDNVLSQELSDKVLNNVLPNRNKEEVKVKHKKRSLFRMQVAAAWLIVISLLGIWFKITHDKKNVTAPLSTHQAVQIHPGGNKAFLTLDDGTVINLNEMEHEAAPSDSNITVEKNDGILIYKNTTGKRSNAKYNKLTTPRGGQFQVLLPDGTKVWLNAASSIRYPLYRNYTKKIKQAGFLLKLM*