ggKbase home page

SCN18_25_8_15_R2_B_scaffold_28517_1

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: 1..1200

Top 3 Functional Annotations

Value Algorithm Source
RHS repeat-associated core domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDE1_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 41.9
  • Coverage: 430.0
  • Bit_score: 280
  • Evalue 2.50e-72
RHS repeat-associated core domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 41.9
  • Coverage: 430.0
  • Bit_score: 280
  • Evalue 7.20e-73
RHS repeat-associated core domain protein {ECO:0000313|EMBL:AEV99381.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.9
  • Coverage: 430.0
  • Bit_score: 280
  • Evalue 3.60e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15 → SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1200
TCCATCAATAAAGATTATACCAATGCCACCACCAACAGCGACCGGTATTTTGCACTGGAACTGGGCTATGACAAGGATCCATCTATAGGCACAAATAACAGTAAACAATACAATGGTAATATAGGCAGCATGCTGTGGAAGAGCGAGGGAGATCAGCACAGGAGAAAATATGATTTTACCTATGATAATGCCAACCGGCTTAATGCAGCGGATTTCGGGCAGTATGCATCAGGTTCCGGGGGATCGGCCGTTTTTAGTAACGGGGTGGTGGATTTTTCAGAATACGGCATAGGCTATGACTATAACGGTAATATCCAAACCCTTAGCCGCAAGGGATTAAAGCTTAACAGCTCTCCTGTAATAGACCAGCTTATCTATAGCTATTACTCCTTTGATAATGCTCCCTATAAAGTAACCGATGGTATCACAAGCAGTGATAACGGCAGCCTGGGTGATTTTAAAGACGGTACCGGTACGGGTGGAGATTATAATAACAACAATGGCAATGGCAGCCTTACCACGGATTTTAACAAGGGGATAAGCTCAATAGCTTACTATAATACCATTGAGCTACCCAAAACCATTACCACTGCCAAAGGCACGATAGGCTATGTATACAGCTATGGGGGAGAAAAGCTTACCAAACAAACCATAGAAACCGCTGCCACGGTATTTTACAATAACAGCACCTATACCAATATCAGCATCACCACTACCACCACCTGGCTGGGCGGGGCGGTGTATGAAAGCAAGGCATATACCAACAACAGCACGCTTAACATGGCGCTGGGCTATACCGACAGGCTGCAGTTCATAGCCCATGAAGAAGGAAGGATAAGACCGCAATACAATAATGCCTCCACCCCCAATACCCCCACCGGCTTTGTGTATGATTATTTTATTAAAGACCACCTGGGTAACATAAGGATGGTGCTGACCGATGAGTACAAGCAGGACATCTACCCTGCAGCAACGCTGGAAGGAGATATCAATACGGACGGCAGCCCCAATGCGGTATTTAAAGAGAAGGATTATTATACCATACCCAATACAGGCAATATTGTAAGCAAACCTTCTGCAGTACCGGATTATAAAAACAAAAATGGATTGACAGGAGCAACAACCGACCCGCCGGTGAATCCCAATCCTAACAGTGATGTTTTAGCCGGCAGCCAGAAAATGTATAAGCTGGATGGAGTG
PROTEIN sequence
Length: 400
SINKDYTNATTNSDRYFALELGYDKDPSIGTNNSKQYNGNIGSMLWKSEGDQHRRKYDFTYDNANRLNAADFGQYASGSGGSAVFSNGVVDFSEYGIGYDYNGNIQTLSRKGLKLNSSPVIDQLIYSYYSFDNAPYKVTDGITSSDNGSLGDFKDGTGTGGDYNNNNGNGSLTTDFNKGISSIAYYNTIELPKTITTAKGTIGYVYSYGGEKLTKQTIETAATVFYNNSTYTNISITTTTTWLGGAVYESKAYTNNSTLNMALGYTDRLQFIAHEEGRIRPQYNNASTPNTPTGFVYDYFIKDHLGNIRMVLTDEYKQDIYPAATLEGDINTDGSPNAVFKEKDYYTIPNTGNIVSKPSAVPDYKNKNGLTGATTDPPVNPNPNSDVLAGSQKMYKLDGV