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SCN18_25_8_15_R2_B_scaffold_551_10

Organism: SCN18_25_8_15_R2_B_SCNpilot_BF_INOC_Bordetella_67_10-related_69_14

near complete RP 49 / 55 MC: 4 BSCG 51 / 51 MC: 5 ASCG 12 / 38 MC: 2
Location: comp(10333..10830)

Top 3 Functional Annotations

Value Algorithm Source
GAF domain protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QL78_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 94.5
  • Coverage: 163.0
  • Bit_score: 307
  • Evalue 6.10e-81
GAF domain protein {ECO:0000313|EMBL:EKY28297.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 163.0
  • Bit_score: 307
  • Evalue 8.60e-81
GAF sensor protein similarity KEGG
DB: KEGG
  • Identity: 78.7
  • Coverage: 164.0
  • Bit_score: 257
  • Evalue 1.60e-66

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 498
ATGTCCTATGTCGCCCGCGACGACCGCCCCGCCGACAAGGCCGAACGCTACGCCGAGGTCGAGGCCGAGATTCTGGCCGTGCTGGACGGAGAGCCGAACCTCACGGCGCGCATGGCCACCGTCGCCTCCATGCTGGCCGACGCCTTCCCCGCCTTCTTCTGGACCGGCTTCTACGTCGTGGACGCGGCCGAGGGCGATGAACTGGTGGTCGGTCCCTATCAGGGCACGCTGGGCTGTCTGCGCATTCCGTTCGGGCGCGGCGTCTGCGGCGCGGCGGCGCAGACGCGCCGGACCCAGGTGGTCGAGGACGTCCACGCCTTCCCCGGCCACATCGCCTGCGACAGCCGCTCGGCCAGCGAGATCGTCGTCCCGGTGCTGGACGCCTCAGGCGCGCTGATCGCCGTGCTGGACGTGGACGCCACGGAAAAGGCCGCCTTCGACGCCGTGGACGCCGAGGCGCTGGAACGGCTGATGAGCAAGGTGTTCGGCGCGGGGTGA
PROTEIN sequence
Length: 166
MSYVARDDRPADKAERYAEVEAEILAVLDGEPNLTARMATVASMLADAFPAFFWTGFYVVDAAEGDELVVGPYQGTLGCLRIPFGRGVCGAAAQTRRTQVVEDVHAFPGHIACDSRSASEIVVPVLDASGALIAVLDVDATEKAAFDAVDAEALERLMSKVFGAG*