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SCN18_25_8_15_R2_B_scaffold_551_13

Organism: SCN18_25_8_15_R2_B_SCNpilot_BF_INOC_Bordetella_67_10-related_69_14

near complete RP 49 / 55 MC: 4 BSCG 51 / 51 MC: 5 ASCG 12 / 38 MC: 2
Location: 12312..12989

Top 3 Functional Annotations

Value Algorithm Source
Putative two-component response regulator n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YK03_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 66.5
  • Coverage: 224.0
  • Bit_score: 309
  • Evalue 2.20e-81
Putative two-component response regulator {ECO:0000313|EMBL:GAD48805.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.5
  • Coverage: 224.0
  • Bit_score: 309
  • Evalue 3.10e-81
two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 69.5
  • Coverage: 223.0
  • Bit_score: 306
  • Evalue 4.00e-81

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 678
ATGCGGATTCTGATCGTCGAGGATGACGACAATCTGGCCGACTGGGTCTCGAGGGGGCTGCGTCAGGCCGGTCATCTGGTCGAACGCTGCGCCGACGGCCGACAAGGGCTGCTGCAGGCCACGACCGAGATCCACGACGTCATCGTTCTGGATCGGATGCTGCCCAGGGTCGACGGCCTGAAGCTGCTTTCGGTGCTGCGGGCCGCCGGGGATTCCACCCCCGTGCTGATGCTCAGCGCCCTGGGGGACGTGGACGAGAAGATCAGGGGCCTGCGGGCGGGCAGCGACGACTATCTGGCCAAGCCCTTCGACCTGGCCGAACTGCTGGCGCGGGTGGAGGCGCTGGGCCGCCGGGCGCCCGCCCTGGCCGCGCTGACGACCACCCTCAGGGTCGGCGATCTGGAGATCGACCTGTTGGGCCACCAGGCCCGGCGGGACGGCCGCAGGATAAGTCTGACCTCGCGCGAATTCCGCATCCTCGAGCATCTGGCCCGGCACGCGGGCCGGGTGGTGACGCGCCTGATGCTGCTGGAGAGCGTCTGGGAATATCGCTTCGACCCCCAGACCAACATCATCGATCAGCACGTCAGCAAGCTGCGCCAGAAGATATCGGCGCCCGGAGAGCCGCCGCTGATCCACACGATCCGCGGCGCCGGCTATGTGATGCGGGCGGACTGA
PROTEIN sequence
Length: 226
MRILIVEDDDNLADWVSRGLRQAGHLVERCADGRQGLLQATTEIHDVIVLDRMLPRVDGLKLLSVLRAAGDSTPVLMLSALGDVDEKIRGLRAGSDDYLAKPFDLAELLARVEALGRRAPALAALTTTLRVGDLEIDLLGHQARRDGRRISLTSREFRILEHLARHAGRVVTRLMLLESVWEYRFDPQTNIIDQHVSKLRQKISAPGEPPLIHTIRGAGYVMRAD*