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SCN18_25_8_15_R2_B_scaffold_551_20

Organism: SCN18_25_8_15_R2_B_SCNpilot_BF_INOC_Bordetella_67_10-related_69_14

near complete RP 49 / 55 MC: 4 BSCG 51 / 51 MC: 5 ASCG 12 / 38 MC: 2
Location: 20294..20956

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036054F1 similarity UNIREF
DB: UNIREF100
  • Identity: 47.0
  • Coverage: 185.0
  • Bit_score: 161
  • Evalue 5.50e-37
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:ETI63847.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.8
  • Coverage: 223.0
  • Bit_score: 158
  • Evalue 8.60e-36
RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 186.0
  • Bit_score: 142
  • Evalue 9.90e-32

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 663
ATGCAATGTGACGACGACGGCAAGGGACAGGCGGGCGGGAGCGGCGGCGTTCGCGATGACAGGGCGCGATGGCTCGCCCTGAACGTGCTTCCGCACGAAGCGGCCGTGCGTCGCTGGCTGGACCGGGGACGTCATCTGCCGGCGGATATCGATGACATCATACAGGAAAGCTACGCCAAGCTGGTCGGACTGGCCGACACCAGCCGCATAGACAACGTCCGGGCCTATTTCTTCCGCACCGCCCATTCGGTCGTGGCGGGGCGATTGCGGCGCAAGACCGTCGTCTCCATCGCCTCCCTGGCTGAAACCGAAAGCCTGTATGAAGGCATAGAGGTGCTGACGCCCGAGGACAGCGTCGTGGCCCGGAACGAGCTGCAAATCCTGTCCGACATGATGGGGCGTCTGCCGGACAAGACCCGCAGGGTCTTCATGCTCAGTCGGGTCGAGGGGCTGAGCCAGAAGGAGATCGCCGATCGAACCGGCATTCCCGAAAGCACGGTCGAGAAACACATCGCCAAGGGAATTCGGCTGCTGACCGAAGCCTATGCGCATGGAGGATATGGCGCGGTGATCGCGTCAAGGCTAGACAGAGCCGCAAGTCAGCGGCCGAGCAGCAGTAAGCGAAAAGGCGGATATGTCCCGGGAGGGAAGCCGAGAGATTGA
PROTEIN sequence
Length: 221
MQCDDDGKGQAGGSGGVRDDRARWLALNVLPHEAAVRRWLDRGRHLPADIDDIIQESYAKLVGLADTSRIDNVRAYFFRTAHSVVAGRLRRKTVVSIASLAETESLYEGIEVLTPEDSVVARNELQILSDMMGRLPDKTRRVFMLSRVEGLSQKEIADRTGIPESTVEKHIAKGIRLLTEAYAHGGYGAVIASRLDRAASQRPSSSKRKGGYVPGGKPRD*