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SCN18_25_8_15_R2_B_scaffold_551_29

Organism: SCN18_25_8_15_R2_B_SCNpilot_BF_INOC_Bordetella_67_10-related_69_14

near complete RP 49 / 55 MC: 4 BSCG 51 / 51 MC: 5 ASCG 12 / 38 MC: 2
Location: 30431..31186

Top 3 Functional Annotations

Value Algorithm Source
Short-chain dehydrogenase/reductase SDR n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V4Z7_SPHWW similarity UNIREF
DB: UNIREF100
  • Identity: 57.8
  • Coverage: 249.0
  • Bit_score: 280
  • Evalue 1.60e-72
Short-chain dehydrogenase {ECO:0000313|EMBL:ETR77552.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.9
  • Coverage: 248.0
  • Bit_score: 285
  • Evalue 7.00e-74
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 249.0
  • Bit_score: 280
  • Evalue 4.50e-73

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 756
ATGAGAACGGACCTGACGGGAAAGGTGGCCTTGGTCACCGGGGCCAGCGCCGGGCTGGGGCGTCATTTCGCCCTGACCCTGGCCCGGGCCGGAGCGGCGGTGGTGCTGTGCGCGCGTCGGCTTGAGGCGCTGGAGGCCCTGGCGCAGGAAATCCGCGCCGACGGCGGCCGGGCCTTGCCGCTCGCGCTCGACCTGTCGGACGCCTCGGCCATGCCGGGCGTGTTCGACGCCGCCGAAGCCGCCTTCGGCACGGTGGACATCCTCATCAACAACGCCGGGGTGGCGGATGGAAAATACGCCACCCGCATGACGCTGGAAGAGGTGGATCACGTGCTGGCGATCAATGTCCGCGCGCCCTTCCTGATGGCGACCGAGGCGGCGCGGCGGCTGATGGCGGCCCAGGCGCCCGGCCGGATCGTCAACCTGTCGTCGGTCGCGGCCTATACCTACACGCACAAGAGCGCGGCGGCCCTCTACGCCACGACCAAGGCGGCGGTGGTCAAGATGACCGAGGCGCTGGCGATCGAGTGGGCGGCCCAGGGGATCAACGTCAACGCCATCGCTCCGGGCCTGTTCAGGTCGGAAATGAGCGCCGGATACATCGAGCGGGCGGGGGACTTCACCGGGCGCTTCCCTCGCGGGCGGGTGGGCGAGCCGGAGCATCTGGAAAGCACCCTGCTCTACCTGGTCGACCCGGTCTCCTCCTTCGTGACCGGCACGACCGTCATCGTCGACGACGCCCAGCAGGGACGATAG
PROTEIN sequence
Length: 252
MRTDLTGKVALVTGASAGLGRHFALTLARAGAAVVLCARRLEALEALAQEIRADGGRALPLALDLSDASAMPGVFDAAEAAFGTVDILINNAGVADGKYATRMTLEEVDHVLAINVRAPFLMATEAARRLMAAQAPGRIVNLSSVAAYTYTHKSAAALYATTKAAVVKMTEALAIEWAAQGINVNAIAPGLFRSEMSAGYIERAGDFTGRFPRGRVGEPEHLESTLLYLVDPVSSFVTGTTVIVDDAQQGR*