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SCN18_25_8_15_R2_B_scaffold_1630_16

Organism: SCN18_25_8_15_R2_B_SCNpilot_BF_INOC_Bordetella_67_10-related_69_14

near complete RP 49 / 55 MC: 4 BSCG 51 / 51 MC: 5 ASCG 12 / 38 MC: 2
Location: comp(14277..14927)

Top 3 Functional Annotations

Value Algorithm Source
HhH-GPD superfamily base excision DNA repair family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWN8_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 215.0
  • Bit_score: 410
  • Evalue 8.80e-112
HhH-GPD superfamily base excision DNA repair family protein {ECO:0000313|EMBL:EGF95442.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 215.0
  • Bit_score: 410
  • Evalue 1.20e-111
HhH-GPD family protein similarity KEGG
DB: KEGG
  • Identity: 65.4
  • Coverage: 214.0
  • Bit_score: 287
  • Evalue 3.20e-75

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 651
ATGGCCCTTGCTCCGTCTCCCGCCTCCGTCGCCGCCGCCCGTGAGGCCCTGGCCGCCGCCGATCCGGCGCTGGCGCGCGCCCACGCCTCGACGCCCGTGTTTGAATGGCGGCTGCGGCCCGGCGGCTATGAGGGGCTGTTCCGCATGATCGTGGAGCAGCAGGTGTCGGTGGCGGCGGCGGCCTCGATCTGGCGGCGGGTGGTCGAGGGGCTGGACGGTCAGGTGACGCCGGACGCCGTGCTGGCGCGCGACGTCGATGCGCTGCGCGCCTTCGGCCTGTCGGGGCAGAAGGCGAAGTACGGCCATGAGATCGCCCGCGCCCATGTCGAGGGCCGCATCGACTTCGACCATCTGGAGCGGATGGACGATGCGCAGGCCGTCGCCGCCCTGGTCGCCATCAAGGGCGTGGGCCGCTGGACGGCCGAGACCTTCCTGATGTTCTGCGAGGGGCGGCAGGACGTCTTTCCCGGCGGGGACGTGGCCCTGCAGGAGGCGATGCGCTGGGCCGACCGCGCCGAGGCCCGTCCCAACGAGAAGCGGGCCTATGCGCGGGCCGAGACCTGGCGGCCGCATCGCGCGGTGGCGGCGCATTTGCTCTGGGGATGGTATGGAGGGGTTCGTCGCGGCGAAATCGCGCTAGAGGACCTCTGA
PROTEIN sequence
Length: 217
MALAPSPASVAAAREALAAADPALARAHASTPVFEWRLRPGGYEGLFRMIVEQQVSVAAAASIWRRVVEGLDGQVTPDAVLARDVDALRAFGLSGQKAKYGHEIARAHVEGRIDFDHLERMDDAQAVAALVAIKGVGRWTAETFLMFCEGRQDVFPGGDVALQEAMRWADRAEARPNEKRAYARAETWRPHRAVAAHLLWGWYGGVRRGEIALEDL*