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SCN18_25_8_15_R2_B_scaffold_1394_20

Organism: SCN18_25_8_15_R2_B_SCNpilot_BF_INOC_Bordetella_67_10-related_69_14

near complete RP 49 / 55 MC: 4 BSCG 51 / 51 MC: 5 ASCG 12 / 38 MC: 2
Location: comp(18353..18829)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L13 n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QQM2_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 158.0
  • Bit_score: 321
  • Evalue 3.90e-85
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 158.0
  • Bit_score: 321
  • Evalue 5.50e-85
50S ribosomal protein L13 similarity KEGG
DB: KEGG
  • Identity: 83.4
  • Coverage: 157.0
  • Bit_score: 273
  • Evalue 2.00e-71

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGCTGAAGAGCACCACGGCTTCCCTGAAGCCGGCCGAGGTCGAGAAGAAGTGGATCCACATCGACGCCGAAGGCGTCGTGGTGGGCCGCCTCGCGACCTTCATCGCCAACCGTCTGCGCGGCAAGCACCTGCCGACCTACACCCCGCACGTGGATTGCGGCGACTACGTCGTCGTCACCAACGTCGACAAGGTGGTGTTCACCGGCAAGAAGAACACCGATAAGGTCTACTATCGCCACACCGGCCACCCGGGCGGCATCAAGGAAACCACCCCGGAGAAGGTCCTGGGCGGTCGTTTCCCCGAGCGCGTGCTCGAAAAGGCCGTTGAGCGCATGCTGCCCAAGGAGTCGCCGCTGGCTCGCAAGCAGATGACCCACCTGCGCCTGTTCGCCGGCGCGGCTCACGAACACGAAGCCCAACAGCCCGAAACCATCGACTTCAAGTCGATGTCGGCCAAGAACACCCGGAGCGCCTGA
PROTEIN sequence
Length: 159
MLKSTTASLKPAEVEKKWIHIDAEGVVVGRLATFIANRLRGKHLPTYTPHVDCGDYVVVTNVDKVVFTGKKNTDKVYYRHTGHPGGIKETTPEKVLGGRFPERVLEKAVERMLPKESPLARKQMTHLRLFAGAAHEHEAQQPETIDFKSMSAKNTRSA*