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SCN18_25_8_15_R2_B_scaffold_4043_2

Organism: SCN18_25_8_15_R2_B_SCNpilot_BF_INOC_Bordetella_67_10-related_69_14

near complete RP 49 / 55 MC: 4 BSCG 51 / 51 MC: 5 ASCG 12 / 38 MC: 2
Location: 407..673

Top 3 Functional Annotations

Value Algorithm Source
Type 1 capsular polysaccharide biosynthesis protein J n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZ56_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 92.0
  • Coverage: 88.0
  • Bit_score: 169
  • Evalue 8.10e-40
Type 1 capsular polysaccharide biosynthesis protein J {ECO:0000313|EMBL:EGF95945.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.0
  • Coverage: 88.0
  • Bit_score: 169
  • Evalue 1.10e-39
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 88.0
  • Bit_score: 102
  • Evalue 3.50e-20

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 267
ATGTCGAACGCTTTCAACCGCCTGTTCCGCGATCACCCGCGCGAGGTCGACGAGACCTATCTCGAGCATATGGCCGCCTCGTCGCGCTTCGGCTTCAGGCTGCTGCGCCTGGCGGGTTGCGCCTTCATCCACGCGGTGGCGCCGGGCCTGCACAGGACCACGGTGTCCGACGCCATTCGCGCCATGGCCCAGGACATGGGCGTCCGCGCCGCCGAGGCCCGCGAATGCCGGATGCGCGACACGGGCGCCTGGGACGTCGGCCTCTAG
PROTEIN sequence
Length: 89
MSNAFNRLFRDHPREVDETYLEHMAASSRFGFRLLRLAGCAFIHAVAPGLHRTTVSDAIRAMAQDMGVRAAEARECRMRDTGAWDVGL*