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SCN18_25_8_15_R2_B_scaffold_699_28

Organism: SCN18_25_8_15_R2_B_Nitrosospira_multiformis_SCNPILOT_SOLID_1_TRIM150_Nitrosospira_54_27_54_34

near complete RP 49 / 55 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: comp(38782..39810)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 313.0
  • Bit_score: 531
  • Evalue 1.20e-148
tRNA pseudouridine synthase B {ECO:0000255|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000255|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000255|HAMAP-Rule:MF_01080}; Short=Psi55 synthase {ECO:0000255|HAMAP-Rule:MF_01080};; tRNA pseudouridylate synthase {ECO:0000255|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000255|HAMAP-Rule:MF_01080}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 313.0
  • Bit_score: 531
  • Evalue 5.80e-148
tRNA pseudouridine synthase B n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=TRUB_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 87.5
  • Coverage: 313.0
  • Bit_score: 531
  • Evalue 4.10e-148

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Taxonomy

Nitrosospira multiformis_SCNPILOT_SOLID_1_TRIM150_Nitrosospira_54_27 → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1029
ATGGCAGTTTCCAGCATCATCTGTAAATCCCGCCTTGCTTTCGATAGCAACTGCCGGGATTCAGGCTGGCTCCAAGACCCCATAGCTCAAATGTCCGCAGGTACCAAGCGGCATATCAGCGGTGTGCTGCTGCTCGATAAAGCGGGTGGCTTTTCTTCCAACCAGGCCCTGCAGACCGCCAAGCGCATTTTTTCTGCTCATAAGGCCGGCCATAGCGGCACGCTCGACCCGATGGCGACAGGCTTGTTGCCCATCTGCTTCGGAGAAGCCACCAAATTTTCATCGGCGCTGCTCCGCGCGGACAAGACATATGAAGCCACGCTGAGACTTGGCTATATGAGTACGACCGGGGATGCAGAGGGGGAGATTTCAATTGCTGCCGGTGCGGACCGCCAATGCATGGATCTGCCATGGGAGAAGATCGAGACAGTATGCAAAAGCTTTATCGGCGTAATTACGCAAGTGCCGCCCATGTACAGCGCGATCAAGCACCGCGGGAAACCCATGTATACCTTTGCCAGGGCAGGAGTGGAAATCAAACGACGGCCGCGTGAGATAACGATCCACGACTTGAGTATCGAGGCGTATCAAGGCGATGAAATACGCATGCGGGTGACATGCGGGAGCGGTACCTACGTTCGTACGCTGGCAGAAGACCTGGGACGGGCGCTGGGATGCGGCGGTGCTTATCTTACCGCATTGTGCCGAAGCGCGCTGGGCGGTTTTGATTTGCCACAGGCGCATACACTGACTGCACTCGAAGCGATGTCGTCCTCTCAACGGGATTCCTGCCTGCTGCCAGCCGATAGTCTCCTGAGGTCTTTTCCCGCGGTGATTGTGGATTCCGCTGCGGCTTTATCTCTGCTCCAGGGACGCGCAATCTCCGGTCATCCGGCAGGGGAAAGTCTCTCACCAGGAAGACAGGTGCGGTTGTATGACAAAAGACAGCGATTCCTTGGGCTGGGAGAAATTTCAACGGAAGGTTACGTCTCACCGAAAAGGCTCATAAAGGCTGAGCAGTCATTGTGA
PROTEIN sequence
Length: 343
MAVSSIICKSRLAFDSNCRDSGWLQDPIAQMSAGTKRHISGVLLLDKAGGFSSNQALQTAKRIFSAHKAGHSGTLDPMATGLLPICFGEATKFSSALLRADKTYEATLRLGYMSTTGDAEGEISIAAGADRQCMDLPWEKIETVCKSFIGVITQVPPMYSAIKHRGKPMYTFARAGVEIKRRPREITIHDLSIEAYQGDEIRMRVTCGSGTYVRTLAEDLGRALGCGGAYLTALCRSALGGFDLPQAHTLTALEAMSSSQRDSCLLPADSLLRSFPAVIVDSAAALSLLQGRAISGHPAGESLSPGRQVRLYDKRQRFLGLGEISTEGYVSPKRLIKAEQSL*