ggKbase home page

SCN18_25_8_15_R2_B_scaffold_531_7

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12_66_16

near complete RP 51 / 55 BSCG 51 / 51 ASCG 11 / 38
Location: comp(6549..7349)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein assembly factor BamD n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZRQ0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 73.4
  • Coverage: 263.0
  • Bit_score: 399
  • Evalue 1.50e-108
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 263.0
  • Bit_score: 399
  • Evalue 2.10e-108
DNA uptake lipoprotein similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 263.0
  • Bit_score: 387
  • Evalue 1.60e-105

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12 → SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 801
ATGATCGCACGCTCCCCCTTCCGGATCGCCATGCTCGCCACCGCCGCGGCCGCGCTAACGCTCACCTCGGGCTGCGCCTCGCTCGGCCGCAAGGGCCCGCGCGACACGGGCTATGTCGCCCGCGACGCGGAATCGCTTTACGCGGCGGCCAAGGAACGGCTCGATCGCGGCGACGTGCAGACCGCCGCCGCCCTGTTCGACGAGGTGGAGCGGCAGCATCCTTATTCGGTCTGGGCGCGCCGGGCGCAATTGATGGGCGCGTTCGCCTATTACCTGCGCAAGGATTACAACAAGTCGATCGAAACCGCTCAGCGGTTCATCTCGATCCACCCCGGCAACAAGGACGCGCCTTACGCCTATTACCTGGTGGCGCTGGATTATTACGAGCAGATCAGCGACGTCGACCGGGACCAGAAGATCACCGAGCAGGCGCTGACCGCGCTGCAGGACGTGCAGCGCCGTTTCCCCGGCAGCCAGTATGCCGCCGACGCCGCGCTCAAGGTCGATCTGGTGCACGATCACCTGGCCGGCAAGGAAATGCAGATCGGCCGCTTCTACCAGCGCACCGGGCAGTGGCTGGCGTCGGAGATCCGGTTCCAGAACGTGGTGGATAAATACCAGACCACCAGCCACGCGCCGGAAGCGCTCTATCGCCTGACGGAATCGAGCCTGGCGCTGGGCCTGCCTTCGGAAGCGAAGAAGTATGCCGCCGTGCTGGGGGTCAATTATCCGGGCAGCAAGTGGTATCAGCGCGCTTATCGGCTGATGGAGCAATACGCCCCCAACGCCACCGCGAGCTGA
PROTEIN sequence
Length: 267
MIARSPFRIAMLATAAAALTLTSGCASLGRKGPRDTGYVARDAESLYAAAKERLDRGDVQTAAALFDEVERQHPYSVWARRAQLMGAFAYYLRKDYNKSIETAQRFISIHPGNKDAPYAYYLVALDYYEQISDVDRDQKITEQALTALQDVQRRFPGSQYAADAALKVDLVHDHLAGKEMQIGRFYQRTGQWLASEIRFQNVVDKYQTTSHAPEALYRLTESSLALGLPSEAKKYAAVLGVNYPGSKWYQRAYRLMEQYAPNATAS*