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SCN18_25_8_15_R2_B_scaffold_418_29

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12_66_16

near complete RP 51 / 55 BSCG 51 / 51 ASCG 11 / 38
Location: comp(29796..30365)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate kinase 1 {ECO:0000313|EMBL:AKH41779.1}; EC=2.7.1.71 {ECO:0000313|EMBL:AKH41779.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 188.0
  • Bit_score: 291
  • Evalue 7.30e-76
Shikimate kinase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YJN3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 189.0
  • Bit_score: 248
  • Evalue 5.10e-63
shikimate kinase similarity KEGG
DB: KEGG
  • Identity: 61.9
  • Coverage: 189.0
  • Bit_score: 237
  • Evalue 1.90e-60

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Taxonomy

SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12 → SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
ATGACCATCGACGCCCGTACCCTCAGCGACAGCGAAATCCGCGCCCTGGCCGCCCGGATCGACCGGCCTATCGTGCTGGTCGGCATGATGGGGGTCGGCAAGTCCACCATCGGCCGCAAGCTGGCCCAGCTGCTCGCGTTGCCTTTCGCCGATGCCGACGACGAGATCGAGGAAGCCGCGCAGATGAGCGTGAGCGAGATCTTCGACAGTTTTGGCGAGCCTTATTTCCGCGATGGAGAGCGGCGCGTGATCGCCCGGCTGCTGGAAAACCCGCCACGCGTGCTGGCAACGGGCGGCGGCGCCTTCGTCCAGCCCGATACGCGGGCCATGATCCTGGAACGCGGCCTGCCGATATGGCTGGACTGCGACGTGAAGACCCTGGTCGATCGGGTGAGCCGCCGGGACCACCGCCCGCTTCTGCGCGGCGGCGATCTCCCGGAAACCGTCGCCCGCCTCAAGGCGGAGCGGGAGCCCGCTTATGCCGAAGCGCCGATCAGGGTGACCAGCGACACAGGCCCGCATGGCGAAACCGTCTCCCGTATCCTGCAGGCACTCGACGCATGGCTGTGA
PROTEIN sequence
Length: 190
MTIDARTLSDSEIRALAARIDRPIVLVGMMGVGKSTIGRKLAQLLALPFADADDEIEEAAQMSVSEIFDSFGEPYFRDGERRVIARLLENPPRVLATGGGAFVQPDTRAMILERGLPIWLDCDVKTLVDRVSRRDHRPLLRGGDLPETVARLKAEREPAYAEAPIRVTSDTGPHGETVSRILQALDAWL*