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SCN18_25_8_15_R2_B_scaffold_97_9

Organism: SCN18_25_8_15_R2_B_Burkholderiales_69_21

near complete RP 50 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 8197..12426

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 1409.0
  • Bit_score: 2725
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=2 Tax=Alicycliphilus denitrificans RepID=E8TVM6_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 1409.0
  • Bit_score: 2725
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 99.3
  • Coverage: 1409.0
  • Bit_score: 2725
  • Evalue 0.0

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Taxonomy

SCNpilot_P_inoc_Acidovorax_64_34 → SCNpilot_P_inoc_Acidovorax_64_34 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4230
ATGAAATCGCTACTCGACCTGTTCAAGCAATTCACGCCGGATGAGCATTTCGATGCCATCAAGATCGGCATGGCTTCGCCCGAGAAGATCCGTTCGTGGTCCTTCGGCGAGGTGAAGAAGCCCGAGACCATCAACTACCGCACGTTCAAGCCCGAGCGCGACGGCCTGTTCTGCGCCAAGATCTTCGGTCCCATCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTGAAGCACCGCGGCGTGATCTGCGAGAAGTGCGGCGTGGAAGTGACCCAGACCAAGGTGCGCCGCGAGCGCATGGGCCACATCGACCTGGCCGCGCCCTGCGCGCACATCTGGTTCCTCAAGAGCCTGCCTTCGCGCCTGGGCCTGGTGCTCGACATGACGCTGCGCGACATCGAGCGCGTGCTGTACTTCGAGGCCTACGTGGTGACCGACCCCGGCATGACGCCGCTGAAGAAGTTCAGCATCATGAGCGAGGACGACTACGACGCCAAGCGCAAGGAGTACGGCGATGAGTTCGTCGCCAAGATGGGCGCCGAGGGCATCAAGGAGCTGCTCGAAGGCATCGACATCGAGATCGAGATCGAGAAGCTGCGCGGCGACCTGACCGGCTCCGAGGTCAAGGTCAAGAAGAACGCCAAGCGCCTGAAGGTGCTCGAAGCCTTCAAGAAGTCCGGCATCAAGCCCGAGTGGATGGTGCTCGAAGTGCTGCCCGTGCTGCCGCCGGACCTGCGTCCGCTGGTGCCGCTCGATGGCGGGCGCTTCGCGACGTCGGACCTGAACGACCTGTACCGCCGCGTCATCAACCGCAACAGCCGCCTGCGCCGCCTGCTCGAACTCAAGGCGCCCGAGATCATCGCGCGCAACGAGAAGCGCATGCTGCAGGAGGCGGTCGATTCGCTGCTGGACAACGGCCGCCGCGGCAAGGCCATGACGGGCGCGAACAAGCGCGCGCTCAAGTCCCTGGCCGACATGATCAAGGGCAAGAGCGGCCGCTTCCGCCAGAACCTGCTGGGCAAGCGCGTCGACTACTCGGGCCGCTCGGTCATCACCGTGGGCCCGACGCTCAAGCTGCACCAGTGCGGCCTGCCCAAGCTCATGGCGCTGGAGCTGTTCAAGCCCTTCATCTTCTCGCGCCTGGAGGCGATGGGCATCGCCACGACCATCAAGGCCGCCAAGAAGGAAGTGGAAGCCGGCACGCCCGTGGTGTGGGACATCCTGGAAGAGGTCATCAAGGAACACCCGGTGATGCTCAACCGTGCGCCCACGCTGCACCGCCTGGGCATCCAGGCGTTCGAGCCGATCCTGATCGAAGGCAAGGCCATCCAGCTGCACCCGCTCGTCTGCGCGGCCTTCAACGCCGACTTCGACGGTGACCAGATGGCCGTGCACGTGCCGCTGTCCGTCGAGGCGCAGTTGGAGGCGCGCACGCTGATGCTGGCGTCGAACAACGTGCTGTTCCCGGCCTCGGGCGAGCCGTCGATCGTGCCGTCGCAGGACGTGGTGCTGGGCCTGTACCACGCCACCCGCGAGAAGATCAACGGCAAGGGCGAGGGCATGGTGTTCACCGACACCGGCGAAGTCCAGCGTGCGCTGGATGCGGGCGAGGTCGAGCTGGCCACCAAGATCAGCGTCCGCCTGACCGAGTGGAACAAGAGCAAGGCCACGGGCGAGTTCGAGCCCGAGACCGCGCTCGTCGAAACCACCGTGGGCCGCGCGCTGCTGTCCGAGATCCTGCCCAAGGGCCTGGCCTTCTCCAACCTGAACAAGGCGCTCAAGAAGAAGGAAATCTCGCGCCTCATCAATGCCTCGTTCCGCAAGTGCGGCCTGAAGGAAACCGTGGTGTTCGCCGACAAGCTGCTGCAGAACGGCTTCCGCCTGGCCACGCGCGCGGGCATCTCGATCTGCGTGGACGACATGCTGGTGCCGCCGCAGAAGGCCGAGATCATCGGCCGCGCCGAGCGGGAAGTGAAGGAGATCGAGCAGCAGTACGTCTCGGGCCTGGTGACGGCCGGCGAGCGCTACAACAAGGTGGTGGACATCTGGGGCAAGGCCGGCGACGAAGTCTCCAAGGTCATGATGCAGCAGCTTGCCAAGCAGAAGACCACCGACCGCCACGGCAAGGAAGTGGACCAGGAGTCGTTCAACTCCATCTACATGATGGCCGACTCGGGCGCCCGCGGCAGCGCGGCGCAGATCCGCCAGCTGGCCGGCATGCGCGGCCTGATGGCCAAGCCCGACGGCTCCATCATCGAGACGCCCATCACCGCGAACTTCCGCGAGGGCCTGAACGTGCTGCAGTACTTCATCTCCACGCACGGTGCCCGCAAGGGCCTGGCCGACACGGCGCTGAAGACGGCCAACTCGGGTTACCTCACGCGCCGCCTGGTGGACGTGACGCAGGACCTGGTGGTGACCGAGGAAGACTGCGGCACCTCCAATGGTTCGCTGATGCGCGCCATCGTCGAGGGCGGCGAGGTCATCGAGTCGCTGCGCGAGCGCATCCTGGGCCGCGTCGCCGCCGAGGACGTGCTGCACCCCGAGACCCGCGCCGTGCTGGTGCCCGCCGGCCGCATGCTGGACGAGGACCTGATCGAGGAGCTGGAGAGCGCCGGCGTCGACGAGGTCAAGGTGCGCACCGCGCTGACCTGCGAGACGCGCTACGGCCTGTGCGCCAAGTGCTACGGCCGCGACCTGGGCCGCGGCGGCCTGATCAACCTCGGCGAAGCCGTGGGCGTGATCGCCGCCCAGTCCATCGGCGAGCCTGGCACGCAGCTGACCATGCGCACGTTCCACATCGGCGGCGCGGCATCGCGCGCGGCCGTGGCGTCCAGCGTCGAGGCCAAGAGCAACGGCGTCATCGGCTTCAACGCCACGATGCGCTACGTGACCAACACCAAGGGAGAGCTGGTGGTGATCGCGCGTTCCGGCGAGGTCATCATCCAGGACGAGCATGGCCGCGAGCGCGAGCGCCACAAGGTGCCCTACGGCGCCACGCTGACGGTGAAGGCCGACCAGCAGATCAAGGCCGGCACCATCCTGGCCAACTGGGATCCGCTGACCCGACCCATCATCACCGAGTTCGCCGGTACGGCCAAGTTCGAGAACGTCGAGGAAGGCCTGACGGTGGCCAAGCAGGTCGACGAGGTGACCGGCTTGTCCACGCTGGTCGTGATCGACCCCAAGCGCCGTGGCTCCGCCAAGGTGGTGCGCCCGCTGGTCAAGCTCATCGACAGCCATGGCCAGGAGGTGAAGATCCCCGGCACCGACCACTCGGTGACGATCGGCTTCCAGGTGGGCGCGCTGATCCAGGTGCGCGACGGCCAGGAAGTGGGCCCCGGCGAAGTGCTGGCGCGCATCCCCGTCGAAGGCCAGAAGACCCGCGACATCACGGGCGGTCTGCCGCGCGTGGCCGAGCTGTTCGAAGCCCGCAGCCCCAAGGACAAGGGCATGCTGGCCGAGATCACCGGCACCGTGTCGTTCGGCAAGGAGACCAAGGGCAAGGTGCGCCTGCAGATCACCGACCCGGACGGCAAGGTGTGGGACGAACTCGTGCCCAAGGAAAAGAACGTGCTGGTGCACGAGGGCCAGGTCGTCAACAAGGGCGAGCTGATCGTGGACGGCCCGGCCGATCCGCAGGACATCCTGCGCCTGCTGGGCATCGAGGAGCTCTCGCGCTACATCGTCGATGAGGTGCAGGACGTGTACCGCCTGCAGGGCGTGAAGATCAACGACAAGCACATCGAGGTGATCGTTCGCCAGATGCTGCGCCGCGTCGTGGTCGAGAACCCCGGCGAGTCCAGCTACATCGCAGGCGAGCAGGTCGAGCGTTCGGAGATCCTCAACACCAACGAGCAGCTGCAGTCCGAGGGCAAGATCCCCGCCACGTACACCAACGTGCTGCTGGGCATCACCAAGGCGTCGCTGTCCACCGACTCGTTCATCTCCGCCGCGTCGTTCCAGGAAACGACCCGCGTGCTCACCGAGGCTGCCATCATGGGCAAGCGCGACGAGCTGCGCGGCCTGAAGGAGAACGTCATCGTCGGCCGCCTGATCCCCGCAGGCACGGGCCTGGCCTACCACCAGGCGCGCAAGGTCAAGGACGCCATGGACGAGGCCGAGCGCCGCGCCATCGCCGAGGCCGAGGCCGCCGAGCTGGCCAGCGCGGGTGCCGAGGGCGCGGCCGCCGAGATCGACGGCAGCGCCGACACGGCGGATTAA
PROTEIN sequence
Length: 1410
MKSLLDLFKQFTPDEHFDAIKIGMASPEKIRSWSFGEVKKPETINYRTFKPERDGLFCAKIFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIDLAAPCAHIWFLKSLPSRLGLVLDMTLRDIERVLYFEAYVVTDPGMTPLKKFSIMSEDDYDAKRKEYGDEFVAKMGAEGIKELLEGIDIEIEIEKLRGDLTGSEVKVKKNAKRLKVLEAFKKSGIKPEWMVLEVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNSRLRRLLELKAPEIIARNEKRMLQEAVDSLLDNGRRGKAMTGANKRALKSLADMIKGKSGRFRQNLLGKRVDYSGRSVITVGPTLKLHQCGLPKLMALELFKPFIFSRLEAMGIATTIKAAKKEVEAGTPVVWDILEEVIKEHPVMLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSVEAQLEARTLMLASNNVLFPASGEPSIVPSQDVVLGLYHATREKINGKGEGMVFTDTGEVQRALDAGEVELATKISVRLTEWNKSKATGEFEPETALVETTVGRALLSEILPKGLAFSNLNKALKKKEISRLINASFRKCGLKETVVFADKLLQNGFRLATRAGISICVDDMLVPPQKAEIIGRAEREVKEIEQQYVSGLVTAGERYNKVVDIWGKAGDEVSKVMMQQLAKQKTTDRHGKEVDQESFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVTQDLVVTEEDCGTSNGSLMRAIVEGGEVIESLRERILGRVAAEDVLHPETRAVLVPAGRMLDEDLIEELESAGVDEVKVRTALTCETRYGLCAKCYGRDLGRGGLINLGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSNGVIGFNATMRYVTNTKGELVVIARSGEVIIQDEHGRERERHKVPYGATLTVKADQQIKAGTILANWDPLTRPIITEFAGTAKFENVEEGLTVAKQVDEVTGLSTLVVIDPKRRGSAKVVRPLVKLIDSHGQEVKIPGTDHSVTIGFQVGALIQVRDGQEVGPGEVLARIPVEGQKTRDITGGLPRVAELFEARSPKDKGMLAEITGTVSFGKETKGKVRLQITDPDGKVWDELVPKEKNVLVHEGQVVNKGELIVDGPADPQDILRLLGIEELSRYIVDEVQDVYRLQGVKINDKHIEVIVRQMLRRVVVENPGESSYIAGEQVERSEILNTNEQLQSEGKIPATYTNVLLGITKASLSTDSFISAASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGLAYHQARKVKDAMDEAERRAIAEAEAAELASAGAEGAAAEIDGSADTAD*