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SCN18_30_10_14_R5_P_scaffold_31_27

Organism: SCN18_30_10_14_R5_P_Alphaproteobacteria_65_16

near complete RP 43 / 55 MC: 2 BSCG 49 / 51 MC: 2 ASCG 12 / 38
Location: 29116..29538

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BNT7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 35.6
  • Coverage: 87.0
  • Bit_score: 63
  • Evalue 1.30e-07
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 45.1
  • Coverage: 122.0
  • Bit_score: 109
  • Evalue 2.20e-21

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Taxonomy

SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15 → SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 423
GTGCGCGTTTTTTTGAAGCGTGGTGTCACTCTGACGACCTGCGGGGTGGCTGTGCGGATACTTCTTGTCGAGGATGACGAGGATCTCCGGACGGAAATTCGCGAGTACCTGCAACGCCGTGGCCATGACGTCACAGCGTGCGGGTCACTCGACGATGCCCGCGCGGCTGTCCGGCGCCTTGCTGCTCGCAATATCGCTGCCGAAGCGATCGTCTGCGATGTGAACCTGCCTGACGGCAACGGCATCGATTTTTATGCAGCGTCCGCTGCTGAGCTTCCCACGTGCCATTGGGTCCTGATGTCAGGCGCGCACGATGTGGCACGGATCGACGGGCTGAGCGCCGGGAAAGGCCTGCCGCGCTGCACTATCGTCGAGAAGCCGATGTCGCTGCGGATTCTGAACAGCGCCCTCAATCGGATCTGA
PROTEIN sequence
Length: 141
VRVFLKRGVTLTTCGVAVRILLVEDDEDLRTEIREYLQRRGHDVTACGSLDDARAAVRRLAARNIAAEAIVCDVNLPDGNGIDFYAASAAELPTCHWVLMSGAHDVARIDGLSAGKGLPRCTIVEKPMSLRILNSALNRI*