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SCN18_30_10_14_R5_P_scaffold_290_105

Organism: SCN18_30_10_14_R5_P_Alphaproteobacteria_65_16

near complete RP 43 / 55 MC: 2 BSCG 49 / 51 MC: 2 ASCG 12 / 38
Location: comp(102282..103115)

Top 3 Functional Annotations

Value Algorithm Source
Transcription regulator protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V5P0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 29.4
  • Coverage: 293.0
  • Bit_score: 99
  • Evalue 4.30e-18
Transcription regulator protein {ECO:0000313|EMBL:ENN86377.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.4
  • Coverage: 293.0
  • Bit_score: 99
  • Evalue 6.00e-18
transcription activator, effector binding similarity KEGG
DB: KEGG
  • Identity: 28.7
  • Coverage: 293.0
  • Bit_score: 89
  • Evalue 1.60e-15

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Taxonomy

SCNPILOT_EXPT_1000_BF_Devosia_65_23 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 834
ATGGGGATGCGACTAGCCACGAGTGTCGAGCGTCGCCGTCGGATTCGCCGGGCGGTACGCCATGTCGAGCAGCGTTTCCGCAACGAACCCGATGCGCAGATGAAGCTCGCCGAGTTGGCCGACGTGGCCTGCTTGTCGCTGTTCCATTTCATTCGCCTCTACCAGGGCGCTGTCGGCGAGACGCCGCAGGCGACCCTGCGGCGTCTGCGGCTGGAAGCGGCACGGCAACGACTGATGACCGATCCAGGTCTCAGCGTCACCGAAGTCGCCTTCGACTCGGGCTACGACAGCTCGCAGGCCTTCGCCCGCGCCTACCGCCGGCAGTTCGGGACCGTACCCAGTGCCCGCGATGAAAGGGCGAGTTTGCTGGAGAGTGTCGATGCCACGGTCGTCGAGCTGCCGGCGCTCACCATGCGGACCATGGAGATCGAGCGCAGTTGGGCCGGCGCGTGGACGGCCTATGACGAGCTGATGGGCCGGCTCGAGATCGCCGCCGTACCGATACGCAATCAGAACGTGTTCGGCGTCTTCTCGCCGGACCGCGTCTTCGCCCATGCCTGCGCGCTGGAGAACGATTTCGTCGACGGCCGCTTCCGGCTGCAGCAGCAGCGTCTCGACGGCGGCTGGCATGCCTGCCTCGGTGGCCAGCCCGACGCGGTGTGGCGACGCCTCGATCGTGACGCCGCGCTGAACAAGGCGCGCGTGCCCAACCGGCCGATCCTGATGCGCTACCTCAACGACCCCTCCTACAAGGTCGACACCGAGCAGAAGATCCGGCTCTACGTGCCGCTGGTGGCAGGCGTGCGGCCGGAAGATCTGTCGCTGCTGCTCTGA
PROTEIN sequence
Length: 278
MGMRLATSVERRRRIRRAVRHVEQRFRNEPDAQMKLAELADVACLSLFHFIRLYQGAVGETPQATLRRLRLEAARQRLMTDPGLSVTEVAFDSGYDSSQAFARAYRRQFGTVPSARDERASLLESVDATVVELPALTMRTMEIERSWAGAWTAYDELMGRLEIAAVPIRNQNVFGVFSPDRVFAHACALENDFVDGRFRLQQQRLDGGWHACLGGQPDAVWRRLDRDAALNKARVPNRPILMRYLNDPSYKVDTEQKIRLYVPLVAGVRPEDLSLLL*