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SCN18_30_10_14_R5_P_scaffold_297_63

Organism: SCN18_30_10_14_R5_P_Alphaproteobacteria_65_16

near complete RP 43 / 55 MC: 2 BSCG 49 / 51 MC: 2 ASCG 12 / 38
Location: comp(57976..58737)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein IclR n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HRC4_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 42.4
  • Coverage: 245.0
  • Bit_score: 171
  • Evalue 8.10e-40
Transcriptional regulator {ECO:0000313|EMBL:ETR78341.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.8
  • Coverage: 248.0
  • Bit_score: 239
  • Evalue 3.40e-60
DNA-binding transcriptional activator MhpR similarity KEGG
DB: KEGG
  • Identity: 42.4
  • Coverage: 245.0
  • Bit_score: 171
  • Evalue 2.30e-40

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 762
ATGGCTTCCCCGCCCATCATCGAACCGGTCCGACGCAGCTTCGTGCTGCTGGAAGCGCTCAGCCGACGCCGTACCTCGACTGTTTCGGTGCTGGTCGAAGAGACTGGCCTGCCACGACCGACGGTGCTCCGCCTGCTGCATACGCTGATGGCGGTGGGCTATGCCGCCCGCGTATCGCGCGAGCAGGGGTATCGCCTGACCGACAGAGTGCTGGGCCTATCGGGTTCGATCCGCTTCATCGATCATCTCGTCGATGCCGCCATTCCGCATATGAGCCGCTTCACCGCCGACCATGGCTGGCCGCTCTATCTCGCGACAATGAGTTACGGCGCGATCACCATCCGCCATTCGACGGCGCTCGAAAGCCCGATGTCCTTCGAGAGCGCAGGGCTGAATTCACGTCGCTCGGTGCTGCAGAGCGCGGTCGGTCGCGTCTGGCTGGCCTTCTGCGGCGACGAGGAACGGCGGACCATTCTGCGCGATCTCGGGGGGCTCGGGCCGCGCCGTCAGGCGGCGCTCGATGCCGCTCTCCGGCATATCCGCAGTACGGGGCACGCTTTCACACCGCTCAATCCACGAACCCGTCTGAATGGCATGGCGGTGCCCGTTCGACATCTTCAACGGATGCTGGGTTGCCTCTCCATGCGCTTTCCCCATTCGGCAATGAGCGAAGGAGAGGCCGCTGCCCGCTTCGGCAAACGCCTCCCGCTACTTGCCCGCGAGATCGCGGCCGATGTCGTCGGCCGGCACCCTCTGCGATGA
PROTEIN sequence
Length: 254
MASPPIIEPVRRSFVLLEALSRRRTSTVSVLVEETGLPRPTVLRLLHTLMAVGYAARVSREQGYRLTDRVLGLSGSIRFIDHLVDAAIPHMSRFTADHGWPLYLATMSYGAITIRHSTALESPMSFESAGLNSRRSVLQSAVGRVWLAFCGDEERRTILRDLGGLGPRRQAALDAALRHIRSTGHAFTPLNPRTRLNGMAVPVRHLQRMLGCLSMRFPHSAMSEGEAAARFGKRLPLLAREIAADVVGRHPLR*