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SCN18_30_10_14_R5_P_scaffold_374_21

Organism: SCN18_30_10_14_R5_P_Alphaproteobacteria_65_16

near complete RP 43 / 55 MC: 2 BSCG 49 / 51 MC: 2 ASCG 12 / 38
Location: comp(18922..19560)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SP16_NITWN similarity UNIREF
DB: UNIREF100
  • Identity: 70.1
  • Coverage: 211.0
  • Bit_score: 301
  • Evalue 4.30e-79
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 70.1
  • Coverage: 211.0
  • Bit_score: 301
  • Evalue 1.20e-79
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 212.0
  • Bit_score: 362
  • Evalue 3.80e-97

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 639
ATGAGCTGGAAAAGGCGCGACCGCGAAGAGCGCGGCTACCATCACGGCAATCTGCGCGAGGCGCTGATCAAGGCCGCGCGCGAACTCATCAAGGAGAAGGGCCCGGCGGGCTTCACCTTCGCCGATGCCGCGCGGTCTGCAGGCGTGAGCGCAGCGGCACCCTACCGCCATTTCCGTGACCGTGACGCCCTGCTGGCCGATGTGGCGCGCGAGGGCTTTCAGCGCTTCGAAGCCATGCTCTCGACCGGCTGGGCGGCCGGCAAGCCCGACCCCGTCACGGCTTTTCACAATATCGGCCGCGCCTACCTGGCCTTCGCGCGTGCCGAACCGGCCTATTATGCCGCCATGTTCGAATCTGGCCTGCCGCCCGACCTCAACGTCGAGCTGCGCGCCGCTGGCGACCGGGCCTTCGGCGTGCTGCGCACCGCCGCCGAAACCCTGGTCGGCCTGTTGCCGGCCGGCAAACGACCGCCGGCACTGATGATGAGCCTGCACGTCTGGTCGTTGTCGCACGGCATCGCCTCGCTTTTCGGCCGCGGCGACGCCGGCCGGCGCTCCCTGCCGATGACGGCCGAAGAGCTGCTCGAATCGGCCATGCTGATCTACCTGCAGGGCCTGGGTTTTCCTCAAAAAGCATAA
PROTEIN sequence
Length: 213
MSWKRRDREERGYHHGNLREALIKAARELIKEKGPAGFTFADAARSAGVSAAAPYRHFRDRDALLADVAREGFQRFEAMLSTGWAAGKPDPVTAFHNIGRAYLAFARAEPAYYAAMFESGLPPDLNVELRAAGDRAFGVLRTAAETLVGLLPAGKRPPALMMSLHVWSLSHGIASLFGRGDAGRRSLPMTAEELLESAMLIYLQGLGFPQKA*