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SCN18_30_10_14_R5_P_scaffold_377_1

Organism: SCN18_30_10_14_R5_P_Alphaproteobacteria_65_16

near complete RP 43 / 55 MC: 2 BSCG 49 / 51 MC: 2 ASCG 12 / 38
Location: comp(33..1052)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, substrate-binding protein, putative n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q166U8_ROSDO similarity UNIREF
DB: UNIREF100
  • Identity: 56.8
  • Coverage: 340.0
  • Bit_score: 386
  • Evalue 2.10e-104
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 340.0
  • Bit_score: 386
  • Evalue 6.00e-105
Putative ABC transporter substrate binding protein {ECO:0000313|EMBL:AEI93711.1}; TaxID=391595 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC; 15278 / OCh 149).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.8
  • Coverage: 340.0
  • Bit_score: 386
  • Evalue 3.00e-104

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1020
ATGTTCAGTCGCAGAAGCTTGCTCGCCGGCGCCACCGCACTCGGCGGTGCCTCCCTCCTTCCCGCTATCGCCCACGCCAAGGGCAGCGTCGCCTCGGCGATCTATCCCGGCACCTGGGAGGACGCCTATCGCGCCATCGTGGCGCCGGCGTTGAAGAAAAAGGACGCGGTCGACCTCGAACTGCAGCCGCTGTTCGCCGTCGACCAGATCGCCAAGGCCCGGGCCGCACGCGGCGCGCCGCCGTTCGATACTTTCGTGCTCGATCCCGGTCCACGCATCACCGGCATCGAGGGCGGTCTGTTCGACAAGTTCGACGGCAAGAAAATCAGCAACGCCTCGAAGTTGCCGGCCGGCACGATCGACGACTGGGGCATCGCCGTGAGCGCCCAGGTCGTAGGCATTGCCTACAATCCCAAGAAGGTGCCGGCACCCAAGGGCTGGAAGGATCTGTTCGCCGAACCCTGGGTCTCGAAGCTCGGCCTCACCGGCTTCCAGACCACCTTCGGCACTGTGTCGCTGATCGAGATCGCCAAGATCTTCGGCGGCTCGGAGACCAACATCGAGCCTGCCCTGGTCGAACTGAAGAAGGTCCTGCCCAAGGTAGCGGCCGTCGGCCAGCCGGCGGCAATGCCGAGCCTTTTCCAGCAAGGCCAGTGCGACGTGATGTATACCAACACGCAGACCGTCGCGACGCTCAAGGGCCGCGGCGTCGACATCGAGTTCGTGAAGCCCGAGACCGGCGCGATCACCTTCTTCACGACGCTGCATATCGCCAAGGGATCGACCGAGGTCGCCAATGCCTACAAATACATCGACGTCGTCCTCAGCAAGGACGTGCAGGAAGCACTGACCAAGCCACCCAATAACCTGGTCCCTGTGAACAAGGATGTCCCGCTTCCCGCTGACCTGCCGATGAAGAACCTCGACGAGATGGCGACCTACGTCCAGCACGACTGGGCCAAGATCAATCCGCTACGCGCCAGCTGGATCGAGAAGTTCAACAAGGAAATGGCGAAGTGA
PROTEIN sequence
Length: 340
MFSRRSLLAGATALGGASLLPAIAHAKGSVASAIYPGTWEDAYRAIVAPALKKKDAVDLELQPLFAVDQIAKARAARGAPPFDTFVLDPGPRITGIEGGLFDKFDGKKISNASKLPAGTIDDWGIAVSAQVVGIAYNPKKVPAPKGWKDLFAEPWVSKLGLTGFQTTFGTVSLIEIAKIFGGSETNIEPALVELKKVLPKVAAVGQPAAMPSLFQQGQCDVMYTNTQTVATLKGRGVDIEFVKPETGAITFFTTLHIAKGSTEVANAYKYIDVVLSKDVQEALTKPPNNLVPVNKDVPLPADLPMKNLDEMATYVQHDWAKINPLRASWIEKFNKEMAK*