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SCN18_30_10_14_R5_P_scaffold_202_23

Organism: SCN18_30_10_14_R5_P_Alphaproteobacteria_65_16

near complete RP 43 / 55 MC: 2 BSCG 49 / 51 MC: 2 ASCG 12 / 38
Location: comp(31598..32218)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036A3276 similarity UNIREF
DB: UNIREF100
  • Identity: 38.4
  • Coverage: 185.0
  • Bit_score: 105
  • Evalue 4.40e-20
Transcriptional regulator, TetR family protein {ECO:0000313|EMBL:AKF03790.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.2
  • Coverage: 194.0
  • Bit_score: 114
  • Evalue 1.70e-22
transcription regulator protein similarity KEGG
DB: KEGG
  • Identity: 34.7
  • Coverage: 213.0
  • Bit_score: 104
  • Evalue 2.10e-20

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Taxonomy

SCN_Variovorax_21x → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 621
GTGCCGACCGCGTTGAAGCCGCGCAAGAAGCCATCGCAGGATCGTTCCACCGCGACCGTGGATGCCATCGTCGAGGCCGCGATTCGCATTTTGCGCGACGGCGGATGGGCCGCCTGCACCACCACGAAGGTAGCGGAGCTCGCGGGCGTATCCGTCGGCTCGCTCTATCAGTACTTCCCCAACCGCGCCGCGATCGCCGTCGAGATCGTGCGCCGCCGCACGCGCAAGCTTCTGTCGGCCGCGATCGGCGTCGACCTCACGGGCGCAGCGAATCTCGAGGAAGGGATCGGTCGTGCCATGGCCGCGTTCCTCACCGAGAAGCGTAGCAGCCTCGACCTGTCGCTGGCGCTGCGCGACGCGCTGCCCGAGGTACAGGGCCGCCAGGCCATCATCGAGGAGGCGCGAAGCTATGCGTCGGCGTTCCGGGCCAAGCTGGCACCGCTGGCCGAAGGCGTGCCGAATGTCGCGCGCCTTGCCGTCGCGATGGCCGCCGTCGAAGGCACGGTCTGGGAGATGCTGGCGCAAGATGGCGCAGCGCTCGAGCAGCCCGAAGCAACGTCGGCGCTGGCCGGCGTTTTCATGGCCGCGGCTGGTCTCGATCCCGGTCGAACCAGATCTTGA
PROTEIN sequence
Length: 207
VPTALKPRKKPSQDRSTATVDAIVEAAIRILRDGGWAACTTTKVAELAGVSVGSLYQYFPNRAAIAVEIVRRRTRKLLSAAIGVDLTGAANLEEGIGRAMAAFLTEKRSSLDLSLALRDALPEVQGRQAIIEEARSYASAFRAKLAPLAEGVPNVARLAVAMAAVEGTVWEMLAQDGAALEQPEATSALAGVFMAAAGLDPGRTRS*