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SCN18_30_10_14_R5_P_scaffold_778_17

Organism: SCN18_30_10_14_R5_P_Alphaproteobacteria_65_16

near complete RP 43 / 55 MC: 2 BSCG 49 / 51 MC: 2 ASCG 12 / 38
Location: 15671..16000

Top 3 Functional Annotations

Value Algorithm Source
Membrane transporters of cation and cationic drug n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BY26_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 55.6
  • Coverage: 108.0
  • Bit_score: 124
  • Evalue 4.90e-26
Multidrug efflux system protein {ECO:0000313|EMBL:KFC74102.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 108.0
  • Bit_score: 140
  • Evalue 1.20e-30
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 107.0
  • Bit_score: 122
  • Evalue 4.00e-26

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Taxonomy

Candidatus Caedibacter acanthamoebae_SCNPILOT_EXPT_500_P_Alphaproteobacteria_novel_39_47 → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 330
ATGAGCACGAGCTGGGGTTGGATCTACCTAGTCGCATCGGGCTTCATCGACGTCGCCTGGGCGCTCACGATGAAGAAGGCCCAGGGCTTTGCGAATCCGGCATGGACGGCCGCATCCCTCCTGCTGCTCGCGGCCTTCGTCTACCTGTTGACCAAGGCGCTGCAGGTGCTGCCGGTCGGCTCGGCCTATGCGGTCTGGACGGGCATCGGCGCGGCCGGCACCGTGCTCGCGGGCATGTTGCTCTTTGCCGAGCCTGCCTCGGCAAACCGTTTGATGTGGATCGCCGTGATCGTCATCGGGATCGTCGGCCTCAACCTGTCGTCTACCTAG
PROTEIN sequence
Length: 110
MSTSWGWIYLVASGFIDVAWALTMKKAQGFANPAWTAASLLLLAAFVYLLTKALQVLPVGSAYAVWTGIGAAGTVLAGMLLFAEPASANRLMWIAVIVIGIVGLNLSST*