ggKbase home page

SCN18_30_10_14_R5_P_scaffold_2598_4

Organism: SCN18_30_10_14_R5_P_Alphaproteobacteria_65_16

near complete RP 43 / 55 MC: 2 BSCG 49 / 51 MC: 2 ASCG 12 / 38
Location: 3983..4888

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.8
  • Coverage: 307.0
  • Bit_score: 379
  • Evalue 3.20e-102
tRNA pseudouridine synthase B n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FU70_PHAMO similarity UNIREF
DB: UNIREF100
  • Identity: 63.8
  • Coverage: 307.0
  • Bit_score: 379
  • Evalue 2.30e-102
truB; tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 61.0
  • Coverage: 308.0
  • Bit_score: 369
  • Evalue 5.20e-100

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120 → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 906
ATGTCACGAACGAGGAAGGGCGAGAAGATCGACGGCTGGGTCGTGCTGGATAAGCCGGAGGGTCTAGGCTCGACTCCGGCGGTCAGTCGCGTGCGCCGGCTGTTCGGTGCGCAGAAGGCAGGGCACGGCGGCACGCTCGATCCGCTGGCCAGCGGCGTGCTGCCCATCGCGCTCGGCGAGGCGACGAAGACCGTGCCGTTCGTGATGGACGGCCGCAAAGAGTACCGCTTCACGCTCCGCTTCGGCGAAGCGCGCTCGACCGAAGACCGCGAAGGTGAGGTCACGGCCACCAGCGAGGCCCGGCCGGACGATAGCGCGATCGCTGCGGCGCTTCCGGCCTTCCTGGGCGAGATCGAGCAGATGCCGCCGGTCTTCTCGGCGCTCAAGGTCGATGGCCGCCGGGCCTACGACCTGGCCCGGGCGGGCGAGGTGGTCGAGCTCAAGCCACGTCGCGTCCTGATCGAACGCCTCGAGTTCCTGGGCCGGCCGGACAGGGACCATGCAGATTTCGTGGTCGGTTGTGGCAAAGGCACCTATATCCGGTCGCTCGGCCGCGATTTGGCGCTGGCCCTGGGGACCGTCGGACACCTGTCGATGCTGCGTCGGACCGCCGCCGGACCCTTCACGGAAGCCGCGGCCATTTCGCTTCCCAAACTGGAGGCCCTCGGGCATATTCCCGCGCTCTTCGGGGCCTTGGCGCCCGTTGCAACCGCGCTGGACGACATCCCGGCGCTGGCCGTGACGGAAGCCCAAGCGGATCGGTTGCGCCAAGGCCAGCCGGTACTCTTGACCCGGGACGCACCGCCGTCCGGCGCTTTGGTTCGCGCCGAGGCCGGCGACAGGCTCGTGGCGCTGGTCCGTTCGGACGGCGCCGCGCTTCAGCCGGTGCGCGTGTTCAACCTTTAA
PROTEIN sequence
Length: 302
MSRTRKGEKIDGWVVLDKPEGLGSTPAVSRVRRLFGAQKAGHGGTLDPLASGVLPIALGEATKTVPFVMDGRKEYRFTLRFGEARSTEDREGEVTATSEARPDDSAIAAALPAFLGEIEQMPPVFSALKVDGRRAYDLARAGEVVELKPRRVLIERLEFLGRPDRDHADFVVGCGKGTYIRSLGRDLALALGTVGHLSMLRRTAAGPFTEAAAISLPKLEALGHIPALFGALAPVATALDDIPALAVTEAQADRLRQGQPVLLTRDAPPSGALVRAEAGDRLVALVRSDGAALQPVRVFNL*