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SCN18_13_7_16_R2_B_scaffold_3446_5

Organism: SCN18_13_7_16_R2_B_Microbacterium_70_8

near complete RP 47 / 55 MC: 5 BSCG 47 / 51 MC: 4 ASCG 11 / 38
Location: 3670..4347

Top 3 Functional Annotations

Value Algorithm Source
Response regulator n=1 Tax=Microbacterium sp. TS-1 RepID=U2XL32_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 75.4
  • Coverage: 224.0
  • Bit_score: 328
  • Evalue 2.70e-87
LuxR family transcriptional regulator {ECO:0000313|EMBL:KHK95383.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 225.0
  • Bit_score: 358
  • Evalue 4.40e-96
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain similarity KEGG
DB: KEGG
  • Identity: 72.6
  • Coverage: 215.0
  • Bit_score: 300
  • Evalue 2.90e-79

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Taxonomy

SCNpilot_P_inoc_Microbacterium_67_17 → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 678
GTGCGCATCCTGATCTGCGAGGACTCCGTCCTCCTCCGCGAGGGGCTCGTGCGGCTGCTCGAGGACGCCGGCCACACGGTGGTCGCGGCCCTGCCGGACGCCGACGGCCTCGCGGACGCGGTCGCCGCGCAGGCGCCGGACCTGTGCATCCTCGATGTCCGTCTTCCCCCGACCCACACCGACGAGGGCATCCGTGCGGCCCTCCGGCTGCGTGTCGCACACCCGGACCTCGCCGTGCTCGTGCTCTCGCAGTACGTCGAGGAGCGCTACGCCACCGAGCTCATCGCGGGCCGCGGGGGAGCGCTCGGCTACCTGCTCAAGGACCGGGTCGCCGACGTCGGCGAGTTCGTCGAGACCGTCGAGCAGATCGCGGCCGGCGGCACGGTGTTCGACCCCGAGGTCGTCGCGCAGCTGCTCGGGCGGCGCGCCCGCGACGAGCGGATGCGGCGGCTCACCGACCGCGAGGCGACGGTGCTCGCCTTCATCGCCGAGGGGAAGTCGAACCAGGCGATCGCGCAGGCGCTGCATGTCAGCGAGGGCAGCGTCGAGAAGCACATCACCTCCCTCTTCCAGAAGCTCGATCTCGAGCCCGACGAGTCGGGCAACCGGCGGGTGCTCGCCGCCCTCGCCCACATCTCGCACAGCGGCGGCCAGCCGCAGACAGGAGACCTCCCATGA
PROTEIN sequence
Length: 226
VRILICEDSVLLREGLVRLLEDAGHTVVAALPDADGLADAVAAQAPDLCILDVRLPPTHTDEGIRAALRLRVAHPDLAVLVLSQYVEERYATELIAGRGGALGYLLKDRVADVGEFVETVEQIAAGGTVFDPEVVAQLLGRRARDERMRRLTDREATVLAFIAEGKSNQAIAQALHVSEGSVEKHITSLFQKLDLEPDESGNRRVLAALAHISHSGGQPQTGDLP*