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SCN18_13_7_16_R2_B_scaffold_3503_3

Organism: SCN18_13_7_16_R2_B_Microbacterium_70_8

near complete RP 47 / 55 MC: 5 BSCG 47 / 51 MC: 4 ASCG 11 / 38
Location: comp(1096..2850)

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 586.0
  • Bit_score: 1065
  • Evalue 0.0
2-isopropylmalate synthase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035C53A1 similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 580.0
  • Bit_score: 1062
  • Evalue 0.0
leuA; isopropylmalate/homocitrate/citramalate synthase similarity KEGG
DB: KEGG
  • Identity: 87.0
  • Coverage: 577.0
  • Bit_score: 1033
  • Evalue 0.0

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Taxonomy

CN-SCN_Microbacterium_18x → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1755
ATGGAGAACACCCAGAAGCCCACGGCCATGCCGATCCACAAGTATCGGCCGTTCCACGAGCAGATCCGCGTCGATCTGCCCGACCGCACCTGGCCATCGGCGCGCATCACGACCGCGCCGCGGTGGTGCGCCGTCGACCTGCGCGACGGCAACCAGGCGCTCATCGATCCGATGAGCCCCGCGCGCAAGCGCATCATGTTCGACCTGCTGGTGAGCATGGGCTACAAGGAGATCGAGGTCGGGTTCCCGTCGGCGAGCCAGACGGACTTCGACTTCGTCCGCCAGCTCATCGAAGAGGGACTGATCCCCGACGACGTGACGATCCAGGTGCTGACCCAGGCACGCGACCACCTCATCGAGCGGACGTACGAGGCGATCGCCGGCGCGAAGCAGGCGATCGTGCATCTGTACAACTCGACCAGCGTGCTCCAGCGCGACGTCGTCTTCCGCAGCGACAAGCAGGGCATCATCGACATCGCCCTGAACGGCGCACGCCTGTGCCGCGAGTTCGAGAAGCGCATCCCGGAGACCCGGGTCTTCTACGAGTACTCGCCGGAGAGCTACACCGGCACCGAGCTCGAGTTCGCGGTAGACATCTGCAACCAGGTGCTCGAGATCTTCGAGCCGACTCCCGAGCGCAAGGTCATCATCAACCTGCCCGCCACCGTCGAGATGGCCACACCGAACGTCTACGCCGACTCGATCGAGTGGATGAACCGGCACCTCGCGCATCGCGAGAACGTCATCCTGTCTCTGCACCCGCACAACGATCGCGGGACGGCCGTCGCCGCCGCCGAGCTGGGATACATGGCCGGCGCGGACCGCATCGAAGGCTGCCTGTTCGGCAACGGGGAGCGCACCGGCAACGTGGATCTGGTCACGCTCGGGGTGAATCTCTTCACGCAGGGCATCGACCCGCAGATCGACTTCAGCGACATCGACCAGGTCAAACGGACCGTCGAGTACTGCAACCAGCTGCCGGTGCCCGAGCGCAGTCCGTGGGGTGGCGACCTGGTCTTCACGGCCTTCAGCGGGTCGCACCAGGACGCGATCAAGAAGGGCTTCGAGGCGATGGAGGCCCGCGCCGCGGCGGAGGGCGTGTCGATCGACGAGCTGGAGTGGGCCGTGCCGTACCTGCCCATCGATCCCAAGGACCTCGGGCGGTCGTACGAGGCGGTCATCCGGGTGAACTCGCAGTCCGGGAAGGGCGGGGTCGCGTACCTGCTGAAGTCCGACCACGCGCTCGACCTGCCGCGCCGCCTGCAGATCGAGTTCTCCGGTGTGGTCCAGGCGAAGACCGATGCCGACGGCGGCGAGGTCACCAGCGACGAGATCTGGTCCGTCTTCACGGACGAGTACCTCCCGTCCGATGTCGACCAGAACCGCTGGGGTCGCTTCGAACTGCTGTCCACGCGCACCGAGAGCGACATGTCCGGTGACGTCACGCTCGAGGTCGCGCTGCGCGACGGAGACGAGCGGGTGGTCGCCACCGGCACCGGGAACGGGCCTGTGGCTGCGTTCCTGGAGATCGTCCGGGCGCAAGGATTCGAGGTGACCCTCTACGACTACGTCGAGCACGCCCTCAGCGCCGGCGGCGATGCGCAGGCGGCGGCCTACGTCGAACTGCAGGTGGATGGCGAGCGCCTCTGGGGCGTCGGCATCGACGGCGACATCTCGACCGCCTCGCTGAAGGCGATCGTGTCGGGTGTGAACCGATCGATCCGCACCAGGGTGCGTGAGCTCACCGCCGTCTGA
PROTEIN sequence
Length: 585
MENTQKPTAMPIHKYRPFHEQIRVDLPDRTWPSARITTAPRWCAVDLRDGNQALIDPMSPARKRIMFDLLVSMGYKEIEVGFPSASQTDFDFVRQLIEEGLIPDDVTIQVLTQARDHLIERTYEAIAGAKQAIVHLYNSTSVLQRDVVFRSDKQGIIDIALNGARLCREFEKRIPETRVFYEYSPESYTGTELEFAVDICNQVLEIFEPTPERKVIINLPATVEMATPNVYADSIEWMNRHLAHRENVILSLHPHNDRGTAVAAAELGYMAGADRIEGCLFGNGERTGNVDLVTLGVNLFTQGIDPQIDFSDIDQVKRTVEYCNQLPVPERSPWGGDLVFTAFSGSHQDAIKKGFEAMEARAAAEGVSIDELEWAVPYLPIDPKDLGRSYEAVIRVNSQSGKGGVAYLLKSDHALDLPRRLQIEFSGVVQAKTDADGGEVTSDEIWSVFTDEYLPSDVDQNRWGRFELLSTRTESDMSGDVTLEVALRDGDERVVATGTGNGPVAAFLEIVRAQGFEVTLYDYVEHALSAGGDAQAAAYVELQVDGERLWGVGIDGDISTASLKAIVSGVNRSIRTRVRELTAV*