ggKbase home page

SCN18_13_7_16_R2_B_scaffold_5342_6

Organism: SCN18_13_7_16_R2_B_Microbacterium_70_8

near complete RP 47 / 55 MC: 5 BSCG 47 / 51 MC: 4 ASCG 11 / 38
Location: 2055..3050

Top 3 Functional Annotations

Value Algorithm Source
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.8
  • Coverage: 325.0
  • Bit_score: 455
  • Evalue 5.10e-125
porphobilinogen deaminase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003495189 similarity UNIREF
DB: UNIREF100
  • Identity: 73.7
  • Coverage: 331.0
  • Bit_score: 465
  • Evalue 3.50e-128
porphobilinogen deaminase similarity KEGG
DB: KEGG
  • Identity: 74.8
  • Coverage: 282.0
  • Bit_score: 418
  • Evalue 1.40e-114

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 996
GTGAGCGCTCCGCTGCGTCTGGGCACCCGCCGCAGCGCCCTCGCCCTGGCGCAGTCGCAGCGGGTCGCCGATGCACTGGCCGCATCCTCCGGTCGCCCGGTCGAGCTCGTGCCGATCACGAGCGAAGGGGATGTGTCGCGCGCATCCCTGTCCGAGCTCGGCGGTCGCGGTGTGTTCGCGACCCGCCTGCGCGAGGCGCTGCTCGCGGGCGAGTGCGATCTGCTCGTCCATTCGCTGAAGGACCTCCCCACGGCGGATGCGCCCGGGCTCGTCATCGCGGCGACGCCCGCGCGCGAGGACGCCCGCGACATCGTCGTCACGCGCGACGGCACGCCCCTGCACGACCTCGCCCCCGGAGCCCTGGTGGGCACCGGCTCGCCCCGCCGCGTCGCGCAGGTGCTGCGTCACAACCCGCGGGTGCGGGTCCAGGACCTCCGCGGCAACGTCGACTCGCGACTCGCCCGCGTGCGGGACGGGGAGCTCGACGCCGTCGTCCTCGCCGCGGCGGGGCTCGTCCGCCTGGGCGGAGACCTCGACGGGCTCTTCGGCGAACCGGTGGGGCTCCGCGAGTGGCCGACGGCGCCCGGGCAGGGCGCGCTCGCCGTGGAGACGAGGGCGGATGCCGCGCCGGAGCTCCGCGACGCGCTCGCCGCGCTGGAGGACGACGCGACGCGGATCGCGGTCACCGCCGAGCGGGCCGTGCTCGCCGGACTCGACGCCGGCTGCAGCGCCCCGGTGGGGGTGCACGCCGAGCTCGCGGAGGGCGATCTGCGCGTGCGCGCCATCGTCTACGCCCTCGACGGGCGCCGCCGGGTCGGCCTCGACCGGACACGTGCGCTGTCGCCGCGGTATGCTCGAAGCGGCAGTGGCAATGGTGCGGACGCTGCCGACGGCGCGGACCCGATCGCGCGCGCTGCGCGTACCGGGGCCGAGATCGCCCGTCGGCTGCTCGAACGTGGGGCGGCTGACCTGGTACCACGAGAGTCGACCCCATGA
PROTEIN sequence
Length: 332
VSAPLRLGTRRSALALAQSQRVADALAASSGRPVELVPITSEGDVSRASLSELGGRGVFATRLREALLAGECDLLVHSLKDLPTADAPGLVIAATPAREDARDIVVTRDGTPLHDLAPGALVGTGSPRRVAQVLRHNPRVRVQDLRGNVDSRLARVRDGELDAVVLAAAGLVRLGGDLDGLFGEPVGLREWPTAPGQGALAVETRADAAPELRDALAALEDDATRIAVTAERAVLAGLDAGCSAPVGVHAELAEGDLRVRAIVYALDGRRRVGLDRTRALSPRYARSGSGNGADAADGADPIARAARTGAEIARRLLERGAADLVPRESTP*